Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC4.13□□□□□ -1.75
CDR1P51861 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.13□□□□□ -1.75
CDR1P51861 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CDR1P51861 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.12□□□□□ -1.75
CDR1P51861 RNU6-933P-201ENST00000384424 107 ntBASIC4.12□□□□□ -1.75
CDR1P51861 Y_RNA.533-201ENST00000384596 114 ntBASIC4.12□□□□□ -1.75
CDR1P51861 Y_RNA.534-201ENST00000384599 112 ntBASIC4.12□□□□□ -1.75
CDR1P51861 SNORD58.1-201ENST00000391313 66 ntBASIC4.12□□□□□ -1.75
CDR1P51861 AL513475.1-201ENST00000406602 315 ntBASIC4.12□□□□□ -1.75
CDR1P51861 HSPE1P8-201ENST00000406997 288 ntBASIC4.12□□□□□ -1.75
CDR1P51861 U3.42-201ENST00000408746 214 ntBASIC4.12□□□□□ -1.75
CDR1P51861 RNU6-130P-201ENST00000411112 103 ntBASIC4.12□□□□□ -1.75
CDR1P51861 RPL7AP73-201ENST00000413490 353 ntBASIC4.12□□□□□ -1.75
CDR1P51861 HMGN2P13-201ENST00000476476 274 ntBASIC4.12□□□□□ -1.75
CDR1P51861 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC4.12□□□□□ -1.75
CDR1P51861 AC022968.1-201ENST00000567372 442 ntBASIC4.12□□□□□ -1.75
CDR1P51861 MIR5701-3-201ENST00000578890 82 ntBASIC4.12□□□□□ -1.75
CDR1P51861 MIR3910-1-201ENST00000580936 111 ntBASIC4.12□□□□□ -1.75
CDR1P51861 MIR5701-1-201ENST00000585138 82 ntBASIC4.12□□□□□ -1.75
CDR1P51861 MIR5701-2-201ENST00000615634 82 ntBASIC4.12□□□□□ -1.75
CDR1P51861 SNORD39.4-201ENST00000620099 78 ntBASIC4.12□□□□□ -1.75
CDR1P51861 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.12□□□□□ -1.75
CDR1P51861 MIR4496-201ENST00000635896 61 ntBASIC4.12□□□□□ -1.75
CDR1P51861 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDR1P51861 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CDR1P51861 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDR1P51861 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.11□□□□□ -1.75
CDR1P51861 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
CDR1P51861 MIR208A-201ENST00000362287 71 ntBASIC4.11□□□□□ -1.75
CDR1P51861 SNORA71.3-201ENST00000362582 128 ntBASIC4.11□□□□□ -1.75
CDR1P51861 RNU1-76P-201ENST00000362903 159 ntBASIC4.11□□□□□ -1.75
CDR1P51861 Y_RNA.84-201ENST00000363011 104 ntBASIC4.11□□□□□ -1.75
CDR1P51861 RNU6-774P-201ENST00000363238 107 ntBASIC4.11□□□□□ -1.75
CDR1P51861 Y_RNA.274-201ENST00000364714 101 ntBASIC4.11□□□□□ -1.75
CDR1P51861 U8.8-201ENST00000365399 135 ntBASIC4.11□□□□□ -1.75
CDR1P51861 RNU6-886P-201ENST00000384319 105 ntBASIC4.11□□□□□ -1.75
CDR1P51861 SNORA69.1-201ENST00000390904 137 ntBASIC4.11□□□□□ -1.75
CDR1P51861 HLFP1-201ENST00000402375 499 ntBASIC4.11□□□□□ -1.75
CDR1P51861 MIR1250-201ENST00000408098 113 ntBASIC4.11□□□□□ -1.75
CDR1P51861 SNORA11.1-201ENST00000408133 129 ntBASIC4.11□□□□□ -1.75
CDR1P51861 RNU2-43P-201ENST00000410306 190 ntBASIC4.11□□□□□ -1.75
CDR1P51861 RNU2-33P-201ENST00000410344 192 ntBASIC4.11□□□□□ -1.75
CDR1P51861 AL353621.1-201ENST00000418219 243 ntBASIC4.11□□□□□ -1.75
CDR1P51861 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC4.11□□□□□ -1.75
CDR1P51861 AC007098.1-201ENST00000420122 367 ntBASIC4.11□□□□□ -1.75
CDR1P51861 AC092423.1-201ENST00000430165 186 ntBASIC4.11□□□□□ -1.75
CDR1P51861 HMGB1P27-201ENST00000431429 603 ntBASIC4.11□□□□□ -1.75
CDR1P51861 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC4.11□□□□□ -1.75
CDR1P51861 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDR1P51861 AC098869.1-201ENST00000481627 292 ntBASIC4.11□□□□□ -1.75
CDR1P51861 SNORA31.6-201ENST00000516241 130 ntBASIC4.11□□□□□ -1.75
CDR1P51861 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.11□□□□□ -1.75
CDR1P51861 MIR3186-201ENST00000577404 85 ntBASIC4.11□□□□□ -1.75
CDR1P51861 AC012669.1-201ENST00000603209 283 ntBASIC4.11□□□□□ -1.75
CDR1P51861 AC073410.2-201ENST00000603240 332 ntBASIC4.11□□□□□ -1.75
CDR1P51861 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.11□□□□□ -1.75
CDR1P51861 RNVU1-4-201ENST00000612985 164 ntBASIC4.11□□□□□ -1.75
CDR1P51861 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.11□□□□□ -1.75
CDR1P51861 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC4.11□□□□□ -1.75
CDR1P51861 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDR1P51861 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDR1P51861 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
CDR1P51861 ZNF299P-201ENST00000406845 1804 ntBASIC4.11□□□□□ -1.75
CDR1P51861 RNU6-263P-201ENST00000363811 107 ntBASIC4.1□□□□□ -1.75
CDR1P51861 Y_RNA.237-201ENST00000364439 102 ntBASIC4.1□□□□□ -1.75
CDR1P51861 Y_RNA.297-201ENST00000364950 91 ntBASIC4.1□□□□□ -1.75
CDR1P51861 RNA5SP97-201ENST00000365006 84 ntBASIC4.1□□□□□ -1.75
CDR1P51861 Y_RNA.324-201ENST00000365165 102 ntBASIC4.1□□□□□ -1.75
CDR1P51861 Y_RNA.352-201ENST00000365439 102 ntBASIC4.1□□□□□ -1.75
CDR1P51861 RNU6ATAC-201ENST00000408749 126 ntBASIC4.1□□□□□ -1.75
CDR1P51861 Y_RNA.592-201ENST00000410274 109 ntBASIC4.1□□□□□ -1.75
CDR1P51861 AC093578.1-201ENST00000415219 368 ntBASIC4.1□□□□□ -1.75
CDR1P51861 AC063979.1-201ENST00000415539 377 ntBASIC4.1□□□□□ -1.75
CDR1P51861 SSXP9-201ENST00000417503 292 ntBASIC4.1□□□□□ -1.75
CDR1P51861 AC096920.1-201ENST00000423991 241 ntBASIC4.1□□□□□ -1.75
CDR1P51861 AC007389.2-201ENST00000434630 306 ntBASIC4.1□□□□□ -1.75
CDR1P51861 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.1□□□□□ -1.75
CDR1P51861 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.1□□□□□ -1.75
CDR1P51861 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.1□□□□□ -1.75
CDR1P51861 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.1□□□□□ -1.75
CDR1P51861 RPL37P6-202ENST00000464216 403 ntBASIC4.1□□□□□ -1.75
CDR1P51861 RPL23AP14-201ENST00000468281 468 ntBASIC4.1□□□□□ -1.75
CDR1P51861 RN7SL330P-201ENST00000469709 307 ntBASIC4.1□□□□□ -1.75
CDR1P51861 AC008716.1-201ENST00000511084 513 ntBASIC4.1□□□□□ -1.75
CDR1P51861 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.1□□□□□ -1.75
CDR1P51861 AC126177.3-201ENST00000551839 688 ntBASIC4.1□□□□□ -1.75
CDR1P51861 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.1□□□□□ -1.75
CDR1P51861 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC4.1□□□□□ -1.75
CDR1P51861 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC4.1□□□□□ -1.75
CDR1P51861 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDR1P51861 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDR1P51861 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDR1P51861 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC4.1□□□□□ -1.75
CDR1P51861 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CDR1P51861 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.1□□□□□ -1.75
CDR1P51861 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC4.09□□□□□ -1.75
CDR1P51861 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDR1P51861 AL391987.6-201ENST00000305671 199 ntBASIC4.09□□□□□ -1.75
CDR1P51861 RNA5SP387-201ENST00000364226 106 ntBASIC4.09□□□□□ -1.75
CDR1P51861 RNU6-662P-201ENST00000384253 104 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms