Protein–RNA interactions for Protein: Q7Z6J0

SH3RF1, E3 ubiquitin-protein ligase SH3RF1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1Q7Z6J0 AP002826.1-201ENST00000608835 315 ntBASIC5.11□□□□□ -1.59
SH3RF1Q7Z6J0 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SH3RF1Q7Z6J0 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF1Q7Z6J0 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
SH3RF1Q7Z6J0 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.11□□□□□ -1.59
SH3RF1Q7Z6J0 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SH3RF1Q7Z6J0 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC5.11□□□□□ -1.59
SH3RF1Q7Z6J0 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-898P-201ENST00000365627 104 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-211P-201ENST00000384047 107 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-1145P-201ENST00000384246 107 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 MIR329-1-201ENST00000385028 80 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 SNORA40-201ENST00000388090 126 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 MTHFD2P2-201ENST00000407725 247 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 AC009237.10-201ENST00000414112 510 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 NDUFB4P7-201ENST00000423198 363 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 TEX41-209ENST00000451478 452 ntTSL 2 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 CPHL1P-201ENST00000461341 3407 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 AC108022.1-201ENST00000493466 478 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 CYCTP-201ENST00000504253 315 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 SNORA43.2-201ENST00000516652 128 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 RNA5SP143-201ENST00000516936 115 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 RNU4-60P-201ENST00000517239 135 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 AC016256.1-201ENST00000547971 354 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 TGIF1P1-201ENST00000558095 802 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 UBL5P4-201ENST00000562584 236 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 AL670379.2-201ENST00000604983 252 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 AC010332.2-201ENST00000613083 1904 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 MIR3653-201ENST00000625572 110 ntBASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SH3RF1Q7Z6J0 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 Z95331.1-201ENST00000623075 23112 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 SPRR2C-201ENST00000290702 219 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 MIR372-201ENST00000362225 67 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 Y_RNA.23-201ENST00000362496 106 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-818P-201ENST00000364837 108 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 RNA5SP366-201ENST00000365454 123 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 RNU6-159P-201ENST00000391080 106 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 RPL27AP8-201ENST00000424277 446 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 AL137159.1-201ENST00000452808 512 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 RN7SL98P-201ENST00000462271 300 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 RPS27AP9-201ENST00000477681 438 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 AC024153.1-201ENST00000603103 365 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 AC024581.2-201ENST00000619986 252 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 Y_RNA.778-201ENST00000620203 90 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 MIR492-201ENST00000638676 116 ntBASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SH3RF1Q7Z6J0 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC5.09□□□□□ -1.6
SH3RF1Q7Z6J0 MAPK10-286ENST00000641208 8747 ntBASIC5.09□□□□□ -1.6
SH3RF1Q7Z6J0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SH3RF1Q7Z6J0 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms