Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
HOXA2O43364 AC126755.2-208ENST00000327792 462 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 AC138969.1-213ENST00000331436 462 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 Y_RNA.71-201ENST00000362892 104 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 SNORA71.2-201ENST00000364941 134 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 RNU4-11P-201ENST00000365287 132 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 MIR539-201ENST00000365690 78 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 RN7SKP177-201ENST00000410567 355 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 COX5BP7-201ENST00000414780 274 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 AC012306.1-201ENST00000423267 114 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 AP000705.1-201ENST00000454567 350 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 RPL30P12-201ENST00000474666 353 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 AC073073.1-201ENST00000493920 463 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA2O43364 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.15□□□□□ -1.59
HOXA2O43364 RNU6-709P-201ENST00000517257 104 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC5.15□□□□□ -1.59
HOXA2O43364 AC090616.3-201ENST00000582184 217 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 AC006380.1-201ENST00000603598 186 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.15□□□□□ -1.59
HOXA2O43364 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA2O43364 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA2O43364 OR14L1P-202ENST00000641545 3009 ntBASIC5.15□□□□□ -1.59
HOXA2O43364 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
HOXA2O43364 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA2O43364 AC005005.4-201ENST00000623789 16698 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA2O43364 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
HOXA2O43364 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA2O43364 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HOXA2O43364 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
HOXA2O43364 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA2O43364 RNU6-153P-201ENST00000364422 104 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 RNU6-245P-201ENST00000384020 107 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 RNU6-217P-201ENST00000384164 104 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 RNU6-376P-201ENST00000384731 106 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 RNU6-381P-201ENST00000391259 108 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 Z98745.1-201ENST00000402553 494 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 RNA5SP239-201ENST00000410218 129 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 AL160275.2-201ENST00000412010 394 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 RPS20P14-201ENST00000412545 360 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 AC009963.1-201ENST00000417265 157 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 AL732292.1-201ENST00000426692 226 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 AC012308.1-201ENST00000451232 178 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 Y_RNA.637-201ENST00000459424 114 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 FPGT-203ENST00000467578 601 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA2O43364 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA2O43364 RNU6-513P-201ENST00000516104 104 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 AC040958.1-201ENST00000561102 201 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC5.14□□□□□ -1.59
HOXA2O43364 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC5.14□□□□□ -1.59
HOXA2O43364 DNAJC19P2-201ENST00000593340 302 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.14□□□□□ -1.59
HOXA2O43364 AL021997.2-201ENST00000615674 271 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 MIR3674-201ENST00000636576 68 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 SALL4P2-201ENST00000423288 2910 ntBASIC5.14□□□□□ -1.59
HOXA2O43364 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HOXA2O43364 AC125257.1-201ENST00000560400 2930 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA2O43364 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXA2O43364 ZNF137P-201ENST00000456718 1920 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HOXA2O43364 RNU6-103P-201ENST00000363686 107 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 RNU6-1325P-201ENST00000364905 105 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 SNORA26.3-201ENST00000391119 136 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 RNU6-1197P-201ENST00000391183 107 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 FTH1P15-201ENST00000406984 280 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 RNA5SP475-201ENST00000410568 110 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 RN7SKP53-201ENST00000411337 315 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.13□□□□□ -1.59
HOXA2O43364 ELOCP21-201ENST00000412558 336 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 AL645608.4-201ENST00000423619 154 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXA2O43364 AC015795.1-201ENST00000513669 327 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 CKS1BP7-201ENST00000522230 235 ntBASIC5.13□□□□□ -1.59
HOXA2O43364 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXA2O43364 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.13□□□□□ -1.59
HOXA2O43364 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HOXA2O43364 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HOXA2O43364 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.13□□□□□ -1.59
HOXA2O43364 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
HOXA2O43364 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
HOXA2O43364 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXA2O43364 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
HOXA2O43364 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
HOXA2O43364 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
HOXA2O43364 RNA5SP447-201ENST00000363749 119 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 RNU6-899P-201ENST00000363947 107 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 AC068538.1-201ENST00000376856 336 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 RNU1-82P-201ENST00000390851 165 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 MIR320B2-201ENST00000408479 138 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 HMGN2P21-201ENST00000447764 270 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 AC011276.1-201ENST00000469688 323 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 AC091179.3-201ENST00000474761 144 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 RPS27P26-201ENST00000494583 239 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 RPL30P5-201ENST00000494923 336 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 RNU6-1282P-201ENST00000516735 96 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 SNORA31.23-201ENST00000517219 133 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 MIR4744-201ENST00000581563 82 ntBASIC5.12□□□□□ -1.59
HOXA2O43364 AL356575.1-201ENST00000603008 283 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms