Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 IPO8P1-201ENST00000455509 3109 ntBASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
KCMF1Q9P0J7 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 ZNF72P-201ENST00000425869 1908 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 Y_RNA.424-201ENST00000384063 103 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 YPEL5P1-201ENST00000419731 367 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 HMGB1P12-201ENST00000438594 598 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 RPL21P11-201ENST00000461458 483 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 PPIAP15-201ENST00000479662 484 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 RNU6-475P-201ENST00000516073 104 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 RNU6-612P-201ENST00000516909 102 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 RNA5SP143-201ENST00000516936 115 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 H3F3AP1-201ENST00000559984 334 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 SRGNP1-201ENST00000603392 451 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 FTX_3.1-201ENST00000610451 147 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 MIR8076-201ENST00000611401 83 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 MIR1244-1-201ENST00000612829 85 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 AC090617.7-201ENST00000623952 126 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 MIR1244-3-201ENST00000635744 85 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 MIR1244-2-201ENST00000636449 85 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 MIR1244-4-202ENST00000636813 85 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 AC118273.1-201ENST00000525324 3006 ntBASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
KCMF1Q9P0J7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 MTND5P9-201ENST00000503854 1755 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 Y_RNA.176-201ENST00000363815 109 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RNU6-217P-201ENST00000384164 104 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RNU6-72P-201ENST00000384285 79 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RNU6-658P-201ENST00000384606 106 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 MIR199A2-201ENST00000385289 110 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RNU6-823P-201ENST00000391042 103 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 AL138885.1-201ENST00000405921 675 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RN7SKP202-201ENST00000410439 330 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RHEBP3-201ENST00000411920 351 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 U8.20-201ENST00000459445 131 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RNU1-103P-201ENST00000516502 125 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RNU6-635P-201ENST00000516651 102 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RNU6-1282P-201ENST00000516735 96 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 RNU6-1183P-201ENST00000517054 60 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 AP000889.1-201ENST00000530968 660 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 AC005476.1-201ENST00000554427 397 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 MIR1254-2-201ENST00000579553 63 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 MIR486-1-201ENST00000612171 68 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 AC027309.3-201ENST00000623419 351 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 AC008669.1-201ENST00000565823 2178 ntBASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.67□□□□□ -1.82
KCMF1Q9P0J7 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 RNU6-78P-201ENST00000362897 107 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 RNU6-238P-201ENST00000363313 106 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 RNU4-42P-201ENST00000364738 142 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 Y_RNA.452-201ENST00000384202 108 ntBASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCMF1Q9P0J7 MIR1302-3-201ENST00000408128 138 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms