Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RNU6-228P-201ENST00000362700 106 ntBASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 RNU6-136P-201ENST00000384663 107 ntBASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 RNU6-440P-201ENST00000390882 105 ntBASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 AL603914.1-201ENST00000401964 204 ntBASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 MIR1250-201ENST00000408098 113 ntBASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 AC007686.1-201ENST00000488511 463 ntBASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 SNORA43.2-201ENST00000516652 128 ntBASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 CYCSP40-201ENST00000575927 294 ntBASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 SDAD1P1-202ENST00000524156 2051 ntBASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TRIM35Q9UPQ4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 MIR494-201ENST00000349529 81 ntBASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 AC093331.1-201ENST00000521474 169 ntBASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 AL031274.2-201ENST00000599419 203 ntBASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TRIM35Q9UPQ4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC022336.2-201ENST00000568966 2538 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 SNORD18B-201ENST00000365659 72 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 RNU6-1113P-201ENST00000384348 107 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 SNORA79-201ENST00000408376 140 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 CYCSP10-201ENST00000417973 294 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 EIF4HP2-201ENST00000424380 563 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC006466.1-201ENST00000438721 289 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 GPM6BP3-201ENST00000442797 145 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 ANP32BP2-201ENST00000454525 545 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC006026.2-201ENST00000457376 180 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC091179.3-201ENST00000474761 144 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 Y_RNA.690-201ENST00000516603 95 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 snoU109.6-201ENST00000516831 118 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 MIR4675-201ENST00000577898 77 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 MIR6853-201ENST00000619642 74 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC104623.2-202ENST00000623477 4002 ntBASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.25□□□□□ -1.41
TRIM35Q9UPQ4 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 RNU6-1249P-201ENST00000363237 111 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 SNORD45.3-201ENST00000363836 72 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 RN7SKP103-201ENST00000363848 320 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 Y_RNA.245-201ENST00000364493 95 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 Y_RNA.368-201ENST00000365547 113 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 RNU6-1124P-201ENST00000384169 107 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 SNORD12C-201ENST00000386307 89 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 RNU1-82P-201ENST00000390851 165 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 BX510359.2-201ENST00000417920 305 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 CKS1BP6-201ENST00000424932 240 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 RNU7-141P-201ENST00000459304 62 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 AL591473.1-201ENST00000464297 313 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 AC025647.1-201ENST00000517879 253 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 AC107016.1-201ENST00000550463 337 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 AC015914.2-201ENST00000618167 288 ntBASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
TRIM35Q9UPQ4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms