Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 Y_RNA.547-201ENST00000384654 119 ntBASIC6.47□□□□□ -1.37
RNF39Q9H2S5 POLR2J4-204ENST00000418424 324 ntBASIC6.47□□□□□ -1.37
RNF39Q9H2S5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF39Q9H2S5 SDC4P-201ENST00000453285 601 ntBASIC6.47□□□□□ -1.37
RNF39Q9H2S5 RN7SL174P-201ENST00000475578 289 ntBASIC6.47□□□□□ -1.37
RNF39Q9H2S5 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.47□□□□□ -1.37
RNF39Q9H2S5 AC011445.2-201ENST00000599274 173 ntBASIC6.47□□□□□ -1.37
RNF39Q9H2S5 CYCSP1-201ENST00000604815 315 ntBASIC6.47□□□□□ -1.37
RNF39Q9H2S5 AC074101.1-201ENST00000637861 241 ntBASIC6.47□□□□□ -1.37
RNF39Q9H2S5 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RNF39Q9H2S5 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.47□□□□□ -1.37
RNF39Q9H2S5 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RNF39Q9H2S5 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF39Q9H2S5 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RNF39Q9H2S5 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF39Q9H2S5 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.37
RNF39Q9H2S5 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF39Q9H2S5 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RNF39Q9H2S5 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RNF39Q9H2S5 PARP4P2-201ENST00000446672 3326 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 RNU6-829P-201ENST00000363700 112 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 RNU6-884P-201ENST00000363889 107 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 AC110620.1-201ENST00000416042 228 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 AC087499.7-201ENST00000441958 109 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 AP000281.1-201ENST00000444036 316 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 AL445665.1-202ENST00000452436 324 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 snoU13.14-201ENST00000459372 104 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 RN7SL352P-201ENST00000466002 277 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 MIR548AE2-201ENST00000583456 67 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 MIR4438-201ENST00000585271 93 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 RN7SL787P-201ENST00000613000 284 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 MIR7978-201ENST00000636158 59 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 MIR4302-201ENST00000638058 60 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 AL355834.1-201ENST00000556602 3965 ntBASIC6.46□□□□□ -1.38
RNF39Q9H2S5 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC6.46□□□□□ -1.38
RNF39Q9H2S5 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AL161901.1-201ENST00000624954 3425 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AC005332.5-201ENST00000591222 2919 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 SNORD8-201ENST00000363915 110 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 RNA5SP117-201ENST00000365294 118 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 RNU6-217P-201ENST00000384164 104 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 MIR520G-201ENST00000385064 90 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 SNORA12-201ENST00000391162 147 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 RPS12P17-201ENST00000438591 377 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AC064862.4-201ENST00000442180 334 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 RPS29P28-201ENST00000446439 141 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 MIR1270-201ENST00000459320 83 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AC023818.1-201ENST00000498379 384 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 RNU6-1098P-201ENST00000516772 96 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AC103706.3-201ENST00000636297 85 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AC010168.2-201ENST00000562691 5428 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AC107027.3-201ENST00000565095 3473 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AC008264.2-201ENST00000610193 3731 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 AL662795.2-201ENST00000624252 3706 ntBASIC6.45□□□□□ -1.38
RNF39Q9H2S5 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RNF39Q9H2S5 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF39Q9H2S5 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC6.44□□□□□ -1.38
RNF39Q9H2S5 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RNF39Q9H2S5 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
RNF39Q9H2S5 SNORA51.1-201ENST00000363243 140 ntBASIC6.44□□□□□ -1.38
RNF39Q9H2S5 Y_RNA.171-201ENST00000363760 102 ntBASIC6.44□□□□□ -1.38
RNF39Q9H2S5 RNA5SP242-201ENST00000364171 118 ntBASIC6.44□□□□□ -1.38
RNF39Q9H2S5 RN7SKP280-201ENST00000364196 304 ntBASIC6.44□□□□□ -1.38
RNF39Q9H2S5 RNU6-975P-201ENST00000384296 105 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms