Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC108738.1-201ENST00000603703 237 ntBASIC5.23□□□□□ -1.57
PHOX2BQ99453 AC005520.5-201ENST00000613926 164 ntBASIC5.23□□□□□ -1.57
PHOX2BQ99453 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
PHOX2BQ99453 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.23□□□□□ -1.57
PHOX2BQ99453 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC5.23□□□□□ -1.57
PHOX2BQ99453 AC004817.4-201ENST00000602396 3625 ntBASIC5.23□□□□□ -1.57
PHOX2BQ99453 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PHOX2BQ99453 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.23□□□□□ -1.57
PHOX2BQ99453 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHOX2BQ99453 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PHOX2BQ99453 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHOX2BQ99453 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHOX2BQ99453 RNU6-324P-201ENST00000363957 106 ntBASIC5.22□□□□□ -1.57
PHOX2BQ99453 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 AL358232.1-201ENST00000448030 501 ntBASIC5.22□□□□□ -1.57
PHOX2BQ99453 AP001781.1-201ENST00000530977 207 ntBASIC5.22□□□□□ -1.57
PHOX2BQ99453 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 AC006115.2-201ENST00000596823 202 ntBASIC5.22□□□□□ -1.57
PHOX2BQ99453 CR381572.2-201ENST00000624852 397 ntBASIC5.22□□□□□ -1.57
PHOX2BQ99453 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PHOX2BQ99453 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
PHOX2BQ99453 AL133383.2-201ENST00000622958 2336 ntBASIC5.22□□□□□ -1.57
PHOX2BQ99453 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
PHOX2BQ99453 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.21□□□□□ -1.57
PHOX2BQ99453 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.57
PHOX2BQ99453 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PHOX2BQ99453 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PHOX2BQ99453 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHOX2BQ99453 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHOX2BQ99453 RNU6-50P-201ENST00000362356 103 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 Y_RNA.337-201ENST00000365312 102 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 SNORA8.3-201ENST00000384679 139 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 RNU6-763P-201ENST00000390865 106 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC5.21□□□□□ -1.58
PHOX2BQ99453 U3.40-201ENST00000408706 208 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 AC099548.1-201ENST00000421443 426 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 RPL23AP1-201ENST00000428990 471 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 RPL23AP58-201ENST00000440453 469 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.21□□□□□ -1.58
PHOX2BQ99453 HMGN2P10-201ENST00000448085 265 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 AC109327.1-201ENST00000471666 403 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 RNU6-436P-201ENST00000516171 114 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 IGKV2OR2-8-201ENST00000558710 300 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 AC006130.2-201ENST00000586202 326 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 AL162713.1-201ENST00000604480 262 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 AC004825.2-201ENST00000616634 455 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 TUG1_4.1-201ENST00000619464 181 ntBASIC5.21□□□□□ -1.58
PHOX2BQ99453 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.21□□□□□ -1.58
PHOX2BQ99453 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.21□□□□□ -1.58
PHOX2BQ99453 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PHOX2BQ99453 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.21□□□□□ -1.58
PHOX2BQ99453 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PHOX2BQ99453 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHOX2BQ99453 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHOX2BQ99453 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHOX2BQ99453 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 RNU6-199P-201ENST00000362954 107 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 RNA5SP447-201ENST00000363749 119 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 RNU6-622P-201ENST00000384272 103 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 MIR607-201ENST00000385241 96 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 CYCSP48-201ENST00000417124 323 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 RPL23AP83-201ENST00000434984 473 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 AL353748.1-201ENST00000440753 474 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 RN7SL188P-201ENST00000469842 285 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 RPS27AP10-201ENST00000496103 208 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 RNU6-1333P-201ENST00000516162 93 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 RNA5SP468-201ENST00000516782 93 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 RNU2-12P-201ENST00000517216 168 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 AC027176.1-201ENST00000560204 514 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 MIR3158-1-201ENST00000583596 81 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 ZYXP1-201ENST00000617638 118 ntBASIC5.2□□□□□ -1.58
PHOX2BQ99453 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHOX2BQ99453 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PHOX2BQ99453 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHOX2BQ99453 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.2□□□□□ -1.58
PHOX2BQ99453 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PHOX2BQ99453 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
PHOX2BQ99453 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHOX2BQ99453 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PHOX2BQ99453 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
PHOX2BQ99453 RNU6-799P-201ENST00000363567 107 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms