Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
U3KQE9 Z73965.1-201ENST00000623412 2297 ntBASIC3.83□□□□□ -1.8
U3KQE9 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
U3KQE9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
U3KQE9 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
U3KQE9 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 AC010332.2-201ENST00000613083 1904 ntBASIC3.82□□□□□ -1.8
U3KQE9 AC139713.2-214ENST00000642059 1811 ntBASIC3.82□□□□□ -1.8
U3KQE9 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
U3KQE9 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
U3KQE9 AC126755.2-208ENST00000327792 462 ntBASIC3.82□□□□□ -1.8
U3KQE9 AC138969.1-213ENST00000331436 462 ntBASIC3.82□□□□□ -1.8
U3KQE9 RNU6-103P-201ENST00000363686 107 ntBASIC3.82□□□□□ -1.8
U3KQE9 RNU1-140P-201ENST00000365040 165 ntBASIC3.82□□□□□ -1.8
U3KQE9 RNU6-793P-201ENST00000384233 104 ntBASIC3.82□□□□□ -1.8
U3KQE9 Y_RNA.498-201ENST00000384460 102 ntBASIC3.82□□□□□ -1.8
U3KQE9 MIR124-3-201ENST00000384866 87 ntBASIC3.82□□□□□ -1.8
U3KQE9 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
U3KQE9 PPIAP31-201ENST00000405422 495 ntBASIC3.82□□□□□ -1.8
U3KQE9 AC125238.1-201ENST00000448842 249 ntBASIC3.82□□□□□ -1.8
U3KQE9 AC072052.1-201ENST00000496556 306 ntBASIC3.82□□□□□ -1.8
U3KQE9 RN7SKP164-201ENST00000516138 266 ntBASIC3.82□□□□□ -1.8
U3KQE9 RN7SKP260-201ENST00000516907 149 ntBASIC3.82□□□□□ -1.8
U3KQE9 MIR4302-201ENST00000638058 60 ntBASIC3.82□□□□□ -1.8
U3KQE9 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
U3KQE9 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
U3KQE9 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
U3KQE9 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.82□□□□□ -1.8
U3KQE9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
U3KQE9 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC3.81□□□□□ -1.8
U3KQE9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
U3KQE9 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.81□□□□□ -1.8
U3KQE9 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
U3KQE9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.81□□□□□ -1.8
U3KQE9 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.81□□□□□ -1.8
U3KQE9 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
U3KQE9 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
U3KQE9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
U3KQE9 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
U3KQE9 RNU6-834P-201ENST00000362367 110 ntBASIC3.81□□□□□ -1.8
U3KQE9 SNORA73.1-201ENST00000363107 205 ntBASIC3.81□□□□□ -1.8
U3KQE9 RNA5SP435-201ENST00000364044 108 ntBASIC3.81□□□□□ -1.8
U3KQE9 RNU6-151P-201ENST00000364158 107 ntBASIC3.81□□□□□ -1.8
U3KQE9 SNORA7.2-201ENST00000364446 145 ntBASIC3.81□□□□□ -1.8
U3KQE9 RNU6-487P-201ENST00000365430 104 ntBASIC3.81□□□□□ -1.8
U3KQE9 MIR888-201ENST00000401186 77 ntBASIC3.81□□□□□ -1.8
U3KQE9 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC3.81□□□□□ -1.8
U3KQE9 U3.36-201ENST00000408418 213 ntBASIC3.81□□□□□ -1.8
U3KQE9 MIR320B2-201ENST00000408479 138 ntBASIC3.81□□□□□ -1.8
U3KQE9 NDUFS5P4-201ENST00000412983 318 ntBASIC3.81□□□□□ -1.8
U3KQE9 AC138623.1-201ENST00000418060 216 ntBASIC3.81□□□□□ -1.8
U3KQE9 AC012306.1-201ENST00000423267 114 ntBASIC3.81□□□□□ -1.8
U3KQE9 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.81□□□□□ -1.8
U3KQE9 CR769767.1-201ENST00000436337 346 ntBASIC3.81□□□□□ -1.8
U3KQE9 HMGB1P37-201ENST00000439613 609 ntBASIC3.81□□□□□ -1.8
U3KQE9 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC3.81□□□□□ -1.8
U3KQE9 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC3.81□□□□□ -1.8
U3KQE9 RN7SL172P-201ENST00000460535 303 ntBASIC3.81□□□□□ -1.8
U3KQE9 RNU6-155P-201ENST00000516347 100 ntBASIC3.81□□□□□ -1.8
U3KQE9 RNU6-919P-201ENST00000516731 104 ntBASIC3.81□□□□□ -1.8
U3KQE9 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.81□□□□□ -1.8
U3KQE9 AC005868.1-201ENST00000536421 331 ntBASIC3.81□□□□□ -1.8
U3KQE9 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.81□□□□□ -1.8
U3KQE9 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
U3KQE9 AC087783.2-201ENST00000605070 562 ntBASIC3.81□□□□□ -1.8
U3KQE9 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC3.81□□□□□ -1.8
U3KQE9 MIR6768-201ENST00000610734 72 ntBASIC3.81□□□□□ -1.8
U3KQE9 MIR3529-201ENST00000637713 78 ntBASIC3.81□□□□□ -1.8
U3KQE9 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
U3KQE9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
U3KQE9 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
U3KQE9 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC3.81□□□□□ -1.8
U3KQE9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
U3KQE9 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
U3KQE9 DHX9P1-201ENST00000436565 3076 ntBASIC3.81□□□□□ -1.8
U3KQE9 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
U3KQE9 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.8□□□□□ -1.8
U3KQE9 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
U3KQE9 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
U3KQE9 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
U3KQE9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
U3KQE9 AP001273.1-201ENST00000624493 3152 ntBASIC3.8□□□□□ -1.8
U3KQE9 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
U3KQE9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
U3KQE9 Y_RNA.127-201ENST00000363386 109 ntBASIC3.8□□□□□ -1.8
U3KQE9 MIR539-201ENST00000365690 78 ntBASIC3.8□□□□□ -1.8
U3KQE9 SNORD20-201ENST00000384550 80 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms