Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 CHD8-213ENST00000557364 8137 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU1-47P-201ENST00000362966 163 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SKP153-201ENST00000365026 316 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU6-949P-201ENST00000384040 107 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 SNORD123-201ENST00000459473 70 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SL571P-201ENST00000468302 295 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 RNA5SP116-201ENST00000516132 98 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 SNX18P27-201ENST00000523611 779 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 AP000867.2-201ENST00000532468 320 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 AL591767.3-201ENST00000554632 525 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 AC034105.2-201ENST00000561866 238 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 AC025574.2-201ENST00000615621 514 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SL680P-201ENST00000620379 299 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 Metazoa_SRP.30-201ENST00000621054 280 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 MIR6754-201ENST00000621121 66 ntBASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 BCAS3-234ENST00000639611 108 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 ZNF736-202ENST00000423484 7119 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 FGD4-202ENST00000427716 8242 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
KRTAP3-3Q9BYR6 AC016717.2-201ENST00000609089 5141 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 NBPF3-202ENST00000318249 3591 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 LBR-201ENST00000272163 3745 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 RNA5SP263-201ENST00000363376 128 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 SNORA67.4-201ENST00000384688 142 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 AC019129.1-201ENST00000403786 261 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 AC023141.10-201ENST00000415634 200 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 AL354983.1-201ENST00000434580 906 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU6-274P-201ENST00000459566 107 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SL12P-201ENST00000473849 290 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 RN7SL869P-201ENST00000497032 300 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 LINC01606-205ENST00000519314 562 ntTSL 4 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 CYCSP29-201ENST00000533731 318 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 AC009997.1-201ENST00000557862 129 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 U6.109-201ENST00000636749 87 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 AL008638.3-201ENST00000623027 5182 ntBASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 IQGAP1-201ENST00000268182 7233 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KRTAP3-3Q9BYR6 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 AC023934.1-201ENST00000574529 2389 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 CTNND1-212ENST00000525902 4984 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 Y_RNA.119-201ENST00000363301 96 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 ZNFX1-202ENST00000371752 7212 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 MIR199B-201ENST00000384849 110 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 RNU1-56P-201ENST00000391303 164 ntBASIC3.6□□□□□ -1.83
KRTAP3-3Q9BYR6 SNORA2C-201ENST00000408564 137 ntBASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms