Protein–RNA interactions for Protein: Q9UJ98

STAG3, Cohesin subunit SA-3, humanhuman

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3Q9UJ98 RPS27P1-201ENST00000450552 247 ntBASIC7.05□□□□□ -1.28
STAG3Q9UJ98 AC010618.1-201ENST00000469924 477 ntBASIC7.05□□□□□ -1.28
STAG3Q9UJ98 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC7.05□□□□□ -1.28
STAG3Q9UJ98 MIR4433B-201ENST00000581329 102 ntBASIC7.05□□□□□ -1.28
STAG3Q9UJ98 AC022726.1-201ENST00000587475 207 ntBASIC7.05□□□□□ -1.28
STAG3Q9UJ98 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC7.05□□□□□ -1.28
STAG3Q9UJ98 AL121839.2-201ENST00000565058 6943 ntBASIC7.05□□□□□ -1.28
STAG3Q9UJ98 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC7.05□□□□□ -1.28
STAG3Q9UJ98 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
STAG3Q9UJ98 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
STAG3Q9UJ98 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
STAG3Q9UJ98 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
STAG3Q9UJ98 PHKBP1-201ENST00000450951 1951 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 AC010329.5-201ENST00000623497 2174 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC7.04□□□□□ -1.28
STAG3Q9UJ98 Y_RNA.179-201ENST00000363844 90 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 SNORD115-8-201ENST00000363856 82 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 RNU6-1048P-201ENST00000364054 107 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 RNU6-294P-201ENST00000364999 102 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 SNORD115-38-201ENST00000365037 82 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 AL591034.1-201ENST00000407447 340 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 RPL26P27-201ENST00000414397 437 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 AC098614.2-201ENST00000426040 255 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 AC112220.1-201ENST00000434628 355 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC7.04□□□□□ -1.28
STAG3Q9UJ98 RPL7AP28-201ENST00000464513 571 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 AC011276.1-201ENST00000469688 323 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 RPL30P12-201ENST00000474666 353 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 CYCSP23-201ENST00000519781 313 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 AC136628.3-201ENST00000521868 290 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 AL391261.4-201ENST00000616012 481 ntBASIC7.04□□□□□ -1.28
STAG3Q9UJ98 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
STAG3Q9UJ98 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC7.04□□□□□ -1.28
STAG3Q9UJ98 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC7.04□□□□□ -1.28
STAG3Q9UJ98 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
STAG3Q9UJ98 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 CARF-208ENST00000428585 2513 ntTSL 2 BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AC068647.1-201ENST00000489539 2265 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AL596211.1-201ENST00000569873 2277 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AC018555.1-201ENST00000567548 1980 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AL512633.1-201ENST00000399931 655 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AL357515.1-201ENST00000402967 542 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 RNU2-68P-201ENST00000410878 191 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 ELOCP21-201ENST00000412558 336 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AL135790.2-201ENST00000437701 267 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 GPM6BP3-201ENST00000442797 145 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AC006026.2-201ENST00000457376 180 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 snoU13.6-201ENST00000458785 104 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AC109327.1-201ENST00000471666 403 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 RN7SL441P-201ENST00000492388 296 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 SCARNA15.2-201ENST00000516409 127 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AC006380.1-201ENST00000603598 186 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 MIR6716-201ENST00000613413 80 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AC112198.2-201ENST00000426589 6996 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 AL450345.1-202ENST00000605741 3881 ntBASIC7.03□□□□□ -1.28
STAG3Q9UJ98 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC7.03□□□□□ -1.28
STAG3Q9UJ98 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
STAG3Q9UJ98 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 DEFB108F-201ENST00000344638 222 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 SNORD32A-201ENST00000364805 84 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 Y_RNA.287-201ENST00000364853 94 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 Y_RNA.393-201ENST00000383936 102 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 U3.37-201ENST00000408528 213 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 RNA5SP475-201ENST00000410568 110 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 RNU6-436P-201ENST00000516171 114 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 RNU6-638P-201ENST00000516582 104 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 RPL23AP53-201ENST00000521854 457 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 MAL2-206ENST00000522187 547 ntTSL 4 BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 MIR3160-1-201ENST00000577972 85 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 AL445567.2-201ENST00000618935 498 ntBASIC7.02□□□□□ -1.29
STAG3Q9UJ98 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
STAG3Q9UJ98 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms