Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC090132.2-201ENST00000615881 347 ntBASIC8.34□□□□□ -1.07
SCAF1Q9H7N4 MIR6133-201ENST00000617057 108 ntBASIC8.34□□□□□ -1.07
SCAF1Q9H7N4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
SCAF1Q9H7N4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
SCAF1Q9H7N4 AC104260.2-201ENST00000623551 3497 ntBASIC8.34□□□□□ -1.07
SCAF1Q9H7N4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
SCAF1Q9H7N4 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
SCAF1Q9H7N4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 Y_RNA.361-201ENST00000365515 120 ntBASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 MIR518D-201ENST00000385014 87 ntBASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 GPS2P1-201ENST00000411761 986 ntBASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 RN7SL197P-201ENST00000466981 299 ntBASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 MIR4666B-201ENST00000578142 81 ntBASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 AL137067.1-201ENST00000615933 120 ntBASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 AC093591.2-201ENST00000565254 3843 ntBASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
SCAF1Q9H7N4 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 MIR433-201ENST00000384837 93 ntBASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 RNU6-603P-201ENST00000411403 107 ntBASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 RPS21P4-201ENST00000487122 248 ntBASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 RNU6-513P-201ENST00000516104 104 ntBASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 MED28P6-201ENST00000558776 231 ntBASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 AL020997.2-201ENST00000602607 184 ntBASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 AC009962.1-201ENST00000567327 3813 ntBASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC8.32□□□□□ -1.08
SCAF1Q9H7N4 SNORA26.3-201ENST00000391119 136 ntBASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 AC016739.1-201ENST00000405359 345 ntBASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 AC019205.3-201ENST00000424573 156 ntBASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 NDUFS5P3-201ENST00000450668 321 ntBASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 AP003357.1-201ENST00000604497 148 ntBASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 AC116447.1-201ENST00000613153 453 ntBASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 AL137067.2-201ENST00000621202 131 ntBASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
SCAF1Q9H7N4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 RNY4P6-201ENST00000363667 96 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 Y_RNA.634-201ENST00000364811 113 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 RNU1-106P-201ENST00000384382 164 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 MIR624-201ENST00000385217 97 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 RNU1-77P-201ENST00000390868 162 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 RNA5SP127-201ENST00000411051 133 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 RPS29P2-201ENST00000479278 136 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 RN7SL459P-201ENST00000481078 302 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 RNA5SP153-201ENST00000516498 76 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 AC083899.1-201ENST00000454465 3819 ntBASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC8.3□□□□□ -1.08
SCAF1Q9H7N4 Y_RNA.366-201ENST00000365540 102 ntBASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 MIR208B-201ENST00000401172 77 ntBASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 AC007064.1-201ENST00000412238 351 ntBASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 RN7SL51P-201ENST00000468230 285 ntBASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 RPS17P15-201ENST00000475609 349 ntBASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 AC126755.2-208ENST00000327792 462 ntBASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 AC138969.1-213ENST00000331436 462 ntBASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 RNU6-1240P-201ENST00000365155 104 ntBASIC8.29□□□□□ -1.08
SCAF1Q9H7N4 DYNLT3P1-201ENST00000378574 347 ntBASIC8.29□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 162.2 ms