Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU6-1241P-201ENST00000384536 107 ntBASIC6.56□□□□□ -1.36
RNF39Q9H2S5 Y_RNA.567-201ENST00000384736 106 ntBASIC6.56□□□□□ -1.36
RNF39Q9H2S5 PPIAP20-201ENST00000449839 135 ntBASIC6.56□□□□□ -1.36
RNF39Q9H2S5 SCARNA18.1-201ENST00000516330 83 ntBASIC6.56□□□□□ -1.36
RNF39Q9H2S5 RNU6-1073P-201ENST00000517182 106 ntBASIC6.56□□□□□ -1.36
RNF39Q9H2S5 MIR4776-2-201ENST00000580204 80 ntBASIC6.56□□□□□ -1.36
RNF39Q9H2S5 AC087685.1-201ENST00000587507 141 ntBASIC6.56□□□□□ -1.36
RNF39Q9H2S5 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF39Q9H2S5 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RNF39Q9H2S5 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF39Q9H2S5 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.56□□□□□ -1.36
RNF39Q9H2S5 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RNF39Q9H2S5 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF39Q9H2S5 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF39Q9H2S5 BCLAF1P1-201ENST00000505813 2752 ntBASIC6.55□□□□□ -1.36
RNF39Q9H2S5 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.55□□□□□ -1.36
RNF39Q9H2S5 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.55□□□□□ -1.36
RNF39Q9H2S5 RNU1-108P-201ENST00000362556 161 ntBASIC6.55□□□□□ -1.36
RNF39Q9H2S5 RNU6-808P-201ENST00000391233 108 ntBASIC6.55□□□□□ -1.36
RNF39Q9H2S5 RNU6-630P-201ENST00000391258 106 ntBASIC6.55□□□□□ -1.36
RNF39Q9H2S5 RNU6-57P-201ENST00000411348 103 ntBASIC6.55□□□□□ -1.36
RNF39Q9H2S5 AL391987.1-201ENST00000441025 200 ntBASIC6.55□□□□□ -1.36
RNF39Q9H2S5 UBL5P1-201ENST00000507979 193 ntBASIC6.55□□□□□ -1.36
RNF39Q9H2S5 AP005639.1-201ENST00000526939 192 ntBASIC6.55□□□□□ -1.36
RNF39Q9H2S5 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.55□□□□□ -1.36
RNF39Q9H2S5 AP000769.2-201ENST00000602344 396 ntBASIC6.55□□□□□ -1.36
RNF39Q9H2S5 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
RNF39Q9H2S5 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF39Q9H2S5 TNRC6A-202ENST00000395799 8438 ntAPPRIS P3 TSL 5 BASIC6.55□□□□□ -1.36
RNF39Q9H2S5 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.55□□□□□ -1.36
RNF39Q9H2S5 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 RN7SKP69-201ENST00000365390 305 ntBASIC6.54□□□□□ -1.36
RNF39Q9H2S5 MIR802-201ENST00000390235 94 ntBASIC6.54□□□□□ -1.36
RNF39Q9H2S5 AL035660.1-201ENST00000422041 222 ntBASIC6.54□□□□□ -1.36
RNF39Q9H2S5 AC245884.2-201ENST00000426257 404 ntBASIC6.54□□□□□ -1.36
RNF39Q9H2S5 RNU1-98P-201ENST00000458992 160 ntBASIC6.54□□□□□ -1.36
RNF39Q9H2S5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 AC233702.9-201ENST00000581528 203 ntBASIC6.54□□□□□ -1.36
RNF39Q9H2S5 AC007448.1-201ENST00000582714 234 ntBASIC6.54□□□□□ -1.36
RNF39Q9H2S5 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF39Q9H2S5 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 AL590240.1-201ENST00000334118 313 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 RNA5SP284-201ENST00000384547 118 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 SNX2P2-201ENST00000424553 323 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 AL445646.1-201ENST00000431784 216 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 RNU7-113P-201ENST00000459273 62 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 SCGB1D5P-201ENST00000515134 247 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 RNU7-25P-201ENST00000516544 62 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 RNU6-1096P-201ENST00000517089 102 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 AC091193.1-201ENST00000604640 448 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 AL034546.1-201ENST00000623740 3693 ntBASIC6.53□□□□□ -1.36
RNF39Q9H2S5 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF39Q9H2S5 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC6.52□□□□□ -1.36
RNF39Q9H2S5 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 SELENOWP1-201ENST00000322792 252 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 RN7SKP81-201ENST00000365603 331 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 AC008171.1-201ENST00000395058 200 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 CKS1BP5-201ENST00000434172 273 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 RNU6-1108P-201ENST00000516308 104 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 MIR4753-201ENST00000585119 83 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 AC006130.2-201ENST00000586202 326 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 AL136131.3-201ENST00000607600 188 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 AL139124.1-201ENST00000609123 421 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 NEAT1_2.1-201ENST00000620525 105 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 MAPK10-372ENST00000641954 3413 ntBASIC6.52□□□□□ -1.37
RNF39Q9H2S5 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RNF39Q9H2S5 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms