Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 RNU2-50P-201ENST00000410494 143 ntBASIC4.86□□□□□ -1.63
HPS1Q92902 RNU6-1245P-201ENST00000411130 106 ntBASIC4.86□□□□□ -1.63
HPS1Q92902 AL359073.1-201ENST00000448036 403 ntBASIC4.86□□□□□ -1.63
HPS1Q92902 HMGB3P8-201ENST00000449709 577 ntBASIC4.86□□□□□ -1.63
HPS1Q92902 Y_RNA.692-201ENST00000516627 105 ntBASIC4.86□□□□□ -1.63
HPS1Q92902 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS1Q92902 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.86□□□□□ -1.63
HPS1Q92902 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS1Q92902 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC4.86□□□□□ -1.63
HPS1Q92902 OR7E18P-201ENST00000592589 702 ntBASIC4.86□□□□□ -1.63
HPS1Q92902 AC012640.5-201ENST00000623897 319 ntBASIC4.86□□□□□ -1.63
HPS1Q92902 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC4.86□□□□□ -1.63
HPS1Q92902 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
HPS1Q92902 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.86□□□□□ -1.63
HPS1Q92902 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
HPS1Q92902 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
HPS1Q92902 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
HPS1Q92902 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HPS1Q92902 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.85□□□□□ -1.63
HPS1Q92902 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
HPS1Q92902 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HPS1Q92902 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HPS1Q92902 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
HPS1Q92902 RNA5SP326-201ENST00000363209 110 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 RNU6-1164P-201ENST00000364428 107 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 RNU6-728P-201ENST00000365375 104 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 SNORA72.4-201ENST00000384174 132 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 AC005042.1-201ENST00000393397 800 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 Z85995.1-201ENST00000415547 335 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 RNF10P1-201ENST00000418589 369 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 BX510359.3-201ENST00000422168 306 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS1Q92902 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS1Q92902 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS1Q92902 RPL39P29-201ENST00000447779 157 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 RN7SKP46-201ENST00000515942 234 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 RNU6-561P-201ENST00000516222 102 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 RNU6-762P-201ENST00000517107 102 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 SNORA43.3-201ENST00000517240 103 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 AC090142.3-201ENST00000519012 385 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS1Q92902 AC122688.1-201ENST00000541494 223 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.85□□□□□ -1.63
HPS1Q92902 AC051619.2-201ENST00000559063 397 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 MIR1273E-201ENST00000581165 102 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 uc_338.28-201ENST00000612082 187 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 MESTIT1_1.1-201ENST00000618871 140 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.85□□□□□ -1.63
HPS1Q92902 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS1Q92902 AC069528.2-201ENST00000624849 1991 ntBASIC4.85□□□□□ -1.63
HPS1Q92902 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
HPS1Q92902 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
HPS1Q92902 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.85□□□□□ -1.63
HPS1Q92902 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS1Q92902 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
HPS1Q92902 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
HPS1Q92902 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.84□□□□□ -1.63
HPS1Q92902 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS1Q92902 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS1Q92902 AC090971.4-201ENST00000560291 1800 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
HPS1Q92902 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
HPS1Q92902 U3.9-201ENST00000363823 204 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HPS1Q92902 SNORA48.4-201ENST00000391089 134 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 AL512633.1-201ENST00000399931 655 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 U3.37-201ENST00000408528 213 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 RNA5SP475-201ENST00000410568 110 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 RN7SKP53-201ENST00000411337 315 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 RPL26P27-201ENST00000414397 437 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 AC096649.2-201ENST00000416186 393 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 AC098614.2-201ENST00000426040 255 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 AL049745.1-201ENST00000433953 286 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC4.84□□□□□ -1.63
HPS1Q92902 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS1Q92902 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.84□□□□□ -1.63
HPS1Q92902 AC146507.2-201ENST00000460608 476 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 RPS26P39-201ENST00000469206 341 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 RPS4XP13-201ENST00000483219 789 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 NIP7P2-201ENST00000485801 544 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS1Q92902 RNA5SP290-201ENST00000517133 127 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 RNU2-12P-201ENST00000517216 168 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 AC021678.3-201ENST00000517893 476 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 RPL23AP53-201ENST00000521854 457 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 AC005868.1-201ENST00000536421 331 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 AC107016.1-201ENST00000550463 337 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.84□□□□□ -1.63
HPS1Q92902 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.84□□□□□ -1.63
HPS1Q92902 MIR4489-201ENST00000578869 62 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 AC024581.2-201ENST00000619986 252 ntBASIC4.84□□□□□ -1.63
HPS1Q92902 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
HPS1Q92902 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
HPS1Q92902 AL359693.1-201ENST00000614959 2407 ntBASIC4.84□□□□□ -1.64
HPS1Q92902 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.84□□□□□ -1.64
HPS1Q92902 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
HPS1Q92902 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.83□□□□□ -1.64
HPS1Q92902 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms