Protein–RNA interactions for Protein: Q9UJU5

FOXD3, Forkhead box protein D3, humanhuman

Predicted RBP Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD3Q9UJU5 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 RNU6-926P-201ENST00000384075 107 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 Y_RNA.464-201ENST00000384282 110 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 AL390729.2-201ENST00000416137 156 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 DNAJC19P7-201ENST00000428811 344 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 BTF3P6-201ENST00000448054 499 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 RPS29P33-201ENST00000456717 146 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 RN7SL517P-201ENST00000462240 305 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 COX6CP14-201ENST00000469580 174 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 CBX3P4-201ENST00000538909 354 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 MIR3690-201ENST00000580266 75 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 MIR4423-201ENST00000580922 80 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 OR51H2P-202ENST00000641424 3046 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 SALL4P2-201ENST00000423288 2910 ntBASIC4.39□□□□□ -1.71
FOXD3Q9UJU5 AC007656.2-201ENST00000624902 4547 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 SNORD115-8-201ENST00000363856 82 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 SNORD115-38-201ENST00000365037 82 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 U8.10-201ENST00000384260 133 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 RPL21P17-201ENST00000397467 475 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 MIR1271-201ENST00000408537 86 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 RN7SKP61-201ENST00000410642 295 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 RN7SKP100-201ENST00000411258 284 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AC017079.2-201ENST00000416102 485 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 BX510359.2-201ENST00000417920 305 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AC092017.2-201ENST00000427600 362 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AL645939.1-201ENST00000453429 797 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AC073901.1-201ENST00000462471 408 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AC084357.1-201ENST00000473404 255 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 MRPL42P6-201ENST00000486397 371 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AC020890.1-201ENST00000491837 504 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 BTF3L4P4-201ENST00000506381 449 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 RNU2-31P-201ENST00000516954 155 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AP006289.1-201ENST00000538089 277 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 MIR4643-201ENST00000577473 78 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 uc_338.18-201ENST00000615451 175 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AC005296.1-201ENST00000616145 209 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 AL445487.1-201ENST00000415694 1580 ntBASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXD3Q9UJU5 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 HAUS6P2-201ENST00000433254 2404 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 MIR411-201ENST00000362239 96 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 RNU1-140P-201ENST00000365040 165 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 RNU6-1035P-201ENST00000384477 107 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 MIR10B-201ENST00000385011 110 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 AC114755.2-201ENST00000413520 361 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 GPM6BP3-201ENST00000442797 145 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 RNU7-120P-201ENST00000459334 63 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 CKS1BP7-201ENST00000522230 235 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 IGKV2D-19-201ENST00000523346 262 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 MIR4284-201ENST00000578924 81 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 RN7SL435P-201ENST00000584418 282 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 DLEU2_6.2-201ENST00000620994 136 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 AC019206.1-201ENST00000621938 425 ntBASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.37□□□□□ -1.71
FOXD3Q9UJU5 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms