Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 MIR8069-1-201ENST00000616627 86 ntBASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 MIR8069-2-201ENST00000621412 86 ntBASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 AC241585.2-209ENST00000638217 143 ntBASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 AL391516.1-201ENST00000554380 2449 ntBASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 AC008079.2-201ENST00000623543 20396 ntBASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
LYSMD3Q7Z3D4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 Y_RNA.121-201ENST00000363309 113 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 Y_RNA.245-201ENST00000364493 95 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 SNORA56-201ENST00000383966 129 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 RNU6-1074P-201ENST00000383995 104 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 RNU6-239P-201ENST00000390990 99 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 HLFP1-201ENST00000402375 499 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 AC245028.1-201ENST00000423259 256 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 AURKAPS2-201ENST00000454983 333 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 ENPP7P9-201ENST00000514456 627 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 RNU6-191P-201ENST00000516295 94 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 RNU6-572P-201ENST00000516724 80 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 AL008718.3-201ENST00000610217 321 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 AC068831.7-201ENST00000616954 363 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 AL353743.1-202ENST00000431724 1695 ntBASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.86□□□□□ -1.63
LYSMD3Q7Z3D4 AC110774.1-201ENST00000623567 2018 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 RNA5SP191-201ENST00000362585 102 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 RNU4-80P-201ENST00000363200 141 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 Y_RNA.319-201ENST00000365138 92 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 RNA5SP87-201ENST00000384155 118 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 U3.30-201ENST00000391308 210 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AC005154.2-201ENST00000438110 379 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 Z82210.1-201ENST00000440037 231 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AC124916.1-201ENST00000444020 547 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AL078601.1-201ENST00000444542 271 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AC005042.3-201ENST00000453230 174 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AC006463.2-201ENST00000473326 348 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 RN7SL558P-201ENST00000497468 299 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AC093840.1-201ENST00000511599 336 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 RN7SKP46-201ENST00000515942 234 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 Y_RNA.686-201ENST00000516548 134 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 RNU6-709P-201ENST00000517257 104 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 CARD18-203ENST00000532895 422 ntTSL 2 BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AP002001.1-203ENST00000534002 267 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AL121603.1-201ENST00000553815 142 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AC022441.3-201ENST00000605737 136 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 CR381572.2-201ENST00000624852 397 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 SDAD1P1-202ENST00000524156 2051 ntBASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
LYSMD3Q7Z3D4 AC107027.3-201ENST00000565095 3473 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 SALL4P2-201ENST00000423288 2910 ntBASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
LYSMD3Q7Z3D4 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms