Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RPL23AP31-201ENST00000456160 467 ntBASIC3.64□□□□□ -1.83
CLK3P49761 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.64□□□□□ -1.83
CLK3P49761 RPL22P13-201ENST00000493291 347 ntBASIC3.64□□□□□ -1.83
CLK3P49761 AP001086.1-201ENST00000494882 321 ntBASIC3.64□□□□□ -1.83
CLK3P49761 AC026801.1-201ENST00000497178 464 ntBASIC3.64□□□□□ -1.83
CLK3P49761 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.64□□□□□ -1.83
CLK3P49761 TBCAP3-201ENST00000512475 312 ntBASIC3.64□□□□□ -1.83
CLK3P49761 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.64□□□□□ -1.83
CLK3P49761 MIR4286-201ENST00000580651 93 ntBASIC3.64□□□□□ -1.83
CLK3P49761 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.64□□□□□ -1.83
CLK3P49761 AL606490.9-201ENST00000603331 271 ntBASIC3.64□□□□□ -1.83
CLK3P49761 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC3.64□□□□□ -1.83
CLK3P49761 AL355810.1-201ENST00000614629 552 ntBASIC3.64□□□□□ -1.83
CLK3P49761 U2.1-201ENST00000618978 145 ntBASIC3.64□□□□□ -1.83
CLK3P49761 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLK3P49761 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
CLK3P49761 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.64□□□□□ -1.83
CLK3P49761 ZNF826P-207ENST00000622273 1910 ntBASIC3.64□□□□□ -1.83
CLK3P49761 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CLK3P49761 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLK3P49761 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CLK3P49761 AC009812.4-201ENST00000569134 1805 ntBASIC3.63□□□□□ -1.83
CLK3P49761 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLK3P49761 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
CLK3P49761 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLK3P49761 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.63□□□□□ -1.83
CLK3P49761 AC093908.1-201ENST00000623125 8092 ntBASIC3.63□□□□□ -1.83
CLK3P49761 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLK3P49761 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.63□□□□□ -1.83
CLK3P49761 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLK3P49761 RNU6-946P-201ENST00000383878 107 ntBASIC3.63□□□□□ -1.83
CLK3P49761 RNU6-434P-201ENST00000384376 107 ntBASIC3.63□□□□□ -1.83
CLK3P49761 RNU6-393P-201ENST00000384475 107 ntBASIC3.63□□□□□ -1.83
CLK3P49761 RNU1-13P-201ENST00000384499 162 ntBASIC3.63□□□□□ -1.83
CLK3P49761 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.63□□□□□ -1.83
CLK3P49761 HLFP1-201ENST00000402375 499 ntBASIC3.63□□□□□ -1.83
CLK3P49761 HSPE1P8-201ENST00000406997 288 ntBASIC3.63□□□□□ -1.83
CLK3P49761 RNU6-101P-201ENST00000410323 104 ntBASIC3.63□□□□□ -1.83
CLK3P49761 RNU2-37P-201ENST00000410695 177 ntBASIC3.63□□□□□ -1.83
CLK3P49761 UBE2FP1-201ENST00000416536 447 ntBASIC3.63□□□□□ -1.83
CLK3P49761 PPP1R11P2-201ENST00000423543 382 ntBASIC3.63□□□□□ -1.83
CLK3P49761 RPL7P37-201ENST00000425095 738 ntBASIC3.63□□□□□ -1.83
CLK3P49761 USMG5P1-201ENST00000425964 177 ntBASIC3.63□□□□□ -1.83
CLK3P49761 AC091390.1-201ENST00000433904 331 ntBASIC3.63□□□□□ -1.83
CLK3P49761 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.63□□□□□ -1.83
CLK3P49761 SNORD5.1-201ENST00000458800 75 ntBASIC3.63□□□□□ -1.83
CLK3P49761 AC104472.2-201ENST00000469035 601 ntBASIC3.63□□□□□ -1.83
CLK3P49761 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.63□□□□□ -1.83
CLK3P49761 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.63□□□□□ -1.83
CLK3P49761 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.63□□□□□ -1.83
CLK3P49761 AC091167.4-201ENST00000605079 184 ntBASIC3.63□□□□□ -1.83
CLK3P49761 SNHG22-203ENST00000617833 660 ntBASIC3.63□□□□□ -1.83
CLK3P49761 MIR6500-201ENST00000622700 86 ntBASIC3.63□□□□□ -1.83
CLK3P49761 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.63□□□□□ -1.83
CLK3P49761 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.63□□□□□ -1.83
CLK3P49761 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLK3P49761 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
CLK3P49761 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLK3P49761 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CLK3P49761 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
CLK3P49761 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
CLK3P49761 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.63□□□□□ -1.83
CLK3P49761 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLK3P49761 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CLK3P49761 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLK3P49761 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.62□□□□□ -1.83
CLK3P49761 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLK3P49761 MFSD8-236ENST00000641509 4050 ntBASIC3.62□□□□□ -1.83
CLK3P49761 Y_RNA.380-201ENST00000365663 111 ntBASIC3.62□□□□□ -1.83
CLK3P49761 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.62□□□□□ -1.83
CLK3P49761 RNU6-76P-201ENST00000384060 104 ntBASIC3.62□□□□□ -1.83
CLK3P49761 Y_RNA.473-201ENST00000384333 102 ntBASIC3.62□□□□□ -1.83
CLK3P49761 AL590704.1-201ENST00000402856 794 ntBASIC3.62□□□□□ -1.83
CLK3P49761 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.62□□□□□ -1.83
CLK3P49761 RPL21P24-201ENST00000413752 448 ntBASIC3.62□□□□□ -1.83
CLK3P49761 Z99755.1-201ENST00000414048 380 ntBASIC3.62□□□□□ -1.83
CLK3P49761 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.62□□□□□ -1.83
CLK3P49761 AL590632.1-201ENST00000424289 371 ntBASIC3.62□□□□□ -1.83
CLK3P49761 MTATP6P4-201ENST00000427725 675 ntBASIC3.62□□□□□ -1.83
CLK3P49761 AL117339.2-201ENST00000430475 180 ntBASIC3.62□□□□□ -1.83
CLK3P49761 SUMO1P3-201ENST00000439961 304 ntBASIC3.62□□□□□ -1.83
CLK3P49761 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC3.62□□□□□ -1.83
CLK3P49761 RANP8-201ENST00000444720 713 ntBASIC3.62□□□□□ -1.83
CLK3P49761 AL162389.1-201ENST00000449233 177 ntBASIC3.62□□□□□ -1.83
CLK3P49761 FPGT-203ENST00000467578 601 ntTSL 2 BASIC3.62□□□□□ -1.83
CLK3P49761 AC022493.2-201ENST00000506122 481 ntBASIC3.62□□□□□ -1.83
CLK3P49761 RNU2-69P-201ENST00000516061 100 ntBASIC3.62□□□□□ -1.83
CLK3P49761 RNY3P15-201ENST00000516297 97 ntBASIC3.62□□□□□ -1.83
CLK3P49761 RNU6-1332P-201ENST00000516666 104 ntBASIC3.62□□□□□ -1.83
CLK3P49761 RNU6-307P-201ENST00000516743 106 ntBASIC3.62□□□□□ -1.83
CLK3P49761 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CLK3P49761 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.62□□□□□ -1.83
CLK3P49761 AC008489.1-201ENST00000524271 483 ntBASIC3.62□□□□□ -1.83
CLK3P49761 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.62□□□□□ -1.83
CLK3P49761 AC090877.1-201ENST00000561418 344 ntBASIC3.62□□□□□ -1.83
CLK3P49761 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.62□□□□□ -1.83
CLK3P49761 AC092447.9-201ENST00000603395 144 ntBASIC3.62□□□□□ -1.83
CLK3P49761 AL355297.3-201ENST00000604082 446 ntBASIC3.62□□□□□ -1.83
CLK3P49761 AL670379.4-201ENST00000605279 254 ntBASIC3.62□□□□□ -1.83
CLK3P49761 AC006023.2-201ENST00000609916 167 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms