Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AP004607.3-201ENST00000530354 3915 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 AP001642.1-201ENST00000624727 2117 ntBASIC4.99□□□□□ -1.61
USB1Q9BQ65 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.99□□□□□ -1.61
USB1Q9BQ65 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USB1Q9BQ65 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USB1Q9BQ65 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USB1Q9BQ65 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
USB1Q9BQ65 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USB1Q9BQ65 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 AL356489.2-201ENST00000566968 3528 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 AC126755.2-208ENST00000327792 462 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 AC138969.1-213ENST00000331436 462 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 SNORA51.1-201ENST00000363243 140 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 RN7SKP160-201ENST00000363804 340 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 RN7SKP124-201ENST00000364730 341 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 RNU6-1181P-201ENST00000384191 106 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 Y_RNA.525-201ENST00000384570 113 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 AL357515.1-201ENST00000402967 542 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
USB1Q9BQ65 RPS12P23-201ENST00000419579 400 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 RPS4XP13-201ENST00000483219 789 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 FCF1P8-201ENST00000510322 597 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 ATP5LP3-201ENST00000514223 304 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 SCARNA21.2-201ENST00000516600 166 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 CKS1BP7-201ENST00000522230 235 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 AC090049.2-201ENST00000550377 109 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 MIR4311-201ENST00000580794 100 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 MIR1273E-201ENST00000581165 102 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 AL133481.2-203ENST00000607558 139 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 U7.2-201ENST00000607576 63 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 MIR6729-201ENST00000618194 65 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 AP002799.1-201ENST00000623552 423 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 MIR6844-201ENST00000637122 62 ntBASIC4.98□□□□□ -1.61
USB1Q9BQ65 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USB1Q9BQ65 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USB1Q9BQ65 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.98□□□□□ -1.61
USB1Q9BQ65 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USB1Q9BQ65 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 AL133383.2-201ENST00000622958 2336 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USB1Q9BQ65 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USB1Q9BQ65 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 RNU6-755P-201ENST00000364400 103 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 RNU6-1180P-201ENST00000364935 107 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 RNA5SP30-201ENST00000365552 115 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 RNU6-643P-201ENST00000384018 107 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 MIR320B2-201ENST00000408479 138 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 RPL39P29-201ENST00000447779 157 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 AC245047.8-201ENST00000456455 284 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 AC146507.2-201ENST00000460608 476 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 AL591473.1-201ENST00000464297 313 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 AC051619.2-201ENST00000559063 397 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 MIR3646-201ENST00000578301 84 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 SNORD95-201ENST00000579879 68 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 AC006254.2-201ENST00000603259 279 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 AL391261.4-201ENST00000616012 481 ntBASIC4.97□□□□□ -1.61
USB1Q9BQ65 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.97□□□□□ -1.61
USB1Q9BQ65 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USB1Q9BQ65 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
USB1Q9BQ65 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
USB1Q9BQ65 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
USB1Q9BQ65 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
USB1Q9BQ65 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.96□□□□□ -1.61
USB1Q9BQ65 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.96□□□□□ -1.62
USB1Q9BQ65 DLEU2_6.3-201ENST00000340052 136 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 RNA5SP319-201ENST00000362768 119 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 RNU6-454P-201ENST00000364292 107 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 RNU6-969P-201ENST00000383900 105 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 SNORA18.3-201ENST00000384122 132 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 SNORA72.4-201ENST00000384174 132 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 AC079355.1-201ENST00000421770 223 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 AC019205.3-201ENST00000424573 156 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 EEF1B2P6-201ENST00000445713 673 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 H2AFZP5-201ENST00000446960 382 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 PTMAP3-201ENST00000447474 330 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC4.96□□□□□ -1.62
USB1Q9BQ65 RPL26P9-201ENST00000457466 433 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 AC006517.1-201ENST00000480485 328 ntBASIC4.96□□□□□ -1.62
USB1Q9BQ65 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.96□□□□□ -1.62
USB1Q9BQ65 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms