Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 NIM1K-204ENST00000512796 2929 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 NBPF19-203ENST00000578189 5034 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 FASTKD2-202ENST00000402774 2586 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ICK-201ENST00000350082 6116 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 CNTNAP4-201ENST00000307431 4867 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 CNTNAP4-207ENST00000611870 4867 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 SPATA31A3-201ENST00000428649 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 SPATA31A5-201ENST00000437823 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 NBPF15-206ENST00000581897 4272 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 PPP4R1-203ENST00000400556 3925 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 NAV2-213ENST00000533917 5084 ntTSL 2 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 CAST-234ENST00000511049 3273 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 SNORA7.2-201ENST00000364446 145 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 RNA5SP510-201ENST00000364697 99 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 RNU6-382P-201ENST00000365181 106 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 SNORA8-201ENST00000384574 139 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 MIR188-201ENST00000385034 86 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 MIR143-201ENST00000385300 106 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 TRPM3-211ENST00000396280 4671 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 RN7SKP220-201ENST00000410611 288 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AC068228.1-201ENST00000461723 211 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 RNA5SP287-201ENST00000516358 103 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AL390726.5-202ENST00000564800 256 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 MIR3176-201ENST00000582210 90 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 RPL29P33-201ENST00000587474 316 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AL589743.6-201ENST00000611025 117 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 IARS-205ENST00000443024 4341 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 MDM2-202ENST00000258149 12633 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 NUP107-201ENST00000229179 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 PKD1L2-202ENST00000337114 3427 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 TTLL4-201ENST00000258398 4730 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AC016251.1-201ENST00000624299 4198 ntBASIC2.25□□□□□ -2.05
LCE4AQ5TA78 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 AMBRA1-206ENST00000528950 4102 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 HNRNPU-219ENST00000639628 4546 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
LCE4AQ5TA78 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PTK2B-210ENST00000517339 3914 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 CCDC15-203ENST00000529051 3924 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 RPGR-201ENST00000318842 3108 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 C7orf31-202ENST00000409280 3357 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms