Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
MCCD1P59942 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
MCCD1P59942 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MCCD1P59942 MIR153-2-201ENST00000385225 87 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 MIR607-201ENST00000385241 96 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 AL133270.1-201ENST00000402635 279 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 U3.37-201ENST00000408528 213 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 RNU5A-5P-201ENST00000411054 116 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 RNU2-61P-201ENST00000411069 191 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.1□□□□□ -1.59
MCCD1P59942 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.1□□□□□ -1.59
MCCD1P59942 AC098831.1-201ENST00000440661 216 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.1□□□□□ -1.59
MCCD1P59942 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.1□□□□□ -1.59
MCCD1P59942 AC108751.2-201ENST00000469993 231 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 AC083982.1-201ENST00000485679 344 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 AC093270.2-201ENST00000486157 792 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 HMGB1P22-201ENST00000505315 124 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 RNA5SP446-201ENST00000515955 82 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 RN7SKP276-201ENST00000516242 268 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 SNORA31.8-201ENST00000516327 108 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.1□□□□□ -1.59
MCCD1P59942 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC5.1□□□□□ -1.59
MCCD1P59942 H3F3AP1-201ENST00000559984 334 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC5.1□□□□□ -1.59
MCCD1P59942 MIR5695-201ENST00000579717 85 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.1□□□□□ -1.59
MCCD1P59942 AC008785.1-201ENST00000624475 456 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 AP001642.1-201ENST00000624727 2117 ntBASIC5.1□□□□□ -1.59
MCCD1P59942 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC5.1□□□□□ -1.59
MCCD1P59942 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
MCCD1P59942 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
MCCD1P59942 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.1□□□□□ -1.59
MCCD1P59942 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.1□□□□□ -1.59
MCCD1P59942 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MCCD1P59942 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
MCCD1P59942 AC112198.2-201ENST00000426589 6996 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MCCD1P59942 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.09□□□□□ -1.59
MCCD1P59942 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.09□□□□□ -1.59
MCCD1P59942 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MCCD1P59942 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.09□□□□□ -1.59
MCCD1P59942 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
MCCD1P59942 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MCCD1P59942 Y_RNA.418-201ENST00000384029 102 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 RNU6-658P-201ENST00000384606 106 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 EIF4EBP2P3-201ENST00000403144 334 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 RNU6-1245P-201ENST00000411130 106 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 RNA5SP31-201ENST00000411144 127 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 AC140479.3-201ENST00000418944 1126 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 AP000907.1-201ENST00000428428 510 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 COX6B1P7-201ENST00000430845 235 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 AL031659.1-201ENST00000447075 539 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 RPL23AP81-201ENST00000455252 467 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 IGLV2-34-201ENST00000490007 283 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 RPL36AP41-201ENST00000493820 306 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 RPL7P47-201ENST00000497299 556 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 AP001880.2-201ENST00000538233 448 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC5.09□□□□□ -1.59
MCCD1P59942 TRAV28-201ENST00000557548 323 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 AC051619.2-201ENST00000559063 397 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.09□□□□□ -1.59
MCCD1P59942 AC136601.2-201ENST00000604356 474 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 MZT1P2-201ENST00000604387 248 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 AC072026.1-201ENST00000605023 201 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 AC211433.2-201ENST00000608433 387 ntBASIC5.09□□□□□ -1.59
MCCD1P59942 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
MCCD1P59942 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MCCD1P59942 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
MCCD1P59942 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
MCCD1P59942 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.08□□□□□ -1.6
MCCD1P59942 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
MCCD1P59942 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
MCCD1P59942 RNU6-626P-201ENST00000363354 107 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 RNU6-923P-201ENST00000364753 107 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 RNU6-898P-201ENST00000365627 104 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MCCD1P59942 RNU6-1286P-201ENST00000383871 107 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 AL645733.1-201ENST00000402250 217 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 AL590762.4-201ENST00000425885 253 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.08□□□□□ -1.6
MCCD1P59942 AC009237.8-201ENST00000445492 379 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 SSXP4-201ENST00000451349 245 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MCCD1P59942 AC091021.1-201ENST00000468051 388 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 AF186996.7-201ENST00000492781 209 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 RNY3P16-201ENST00000516338 101 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.08□□□□□ -1.6
MCCD1P59942 MIR3667-201ENST00000581025 74 ntBASIC5.08□□□□□ -1.6
MCCD1P59942 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.08□□□□□ -1.6
MCCD1P59942 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MCCD1P59942 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MCCD1P59942 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.08□□□□□ -1.6
MCCD1P59942 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.08□□□□□ -1.6
MCCD1P59942 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC5.08□□□□□ -1.6
MCCD1P59942 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
MCCD1P59942 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
MCCD1P59942 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
MCCD1P59942 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
MCCD1P59942 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 116.7 ms