Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC112204.1-201ENST00000502591 103 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 SUMO2P6-201ENST00000505273 288 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 AC010486.3-201ENST00000511602 785 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 AF131216.2-201ENST00000512316 564 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 RNU6-1282P-201ENST00000516735 96 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 RNU6-1003P-201ENST00000517099 105 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 RNU6-840P-201ENST00000517275 65 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.72□□□□□ -2.13
COL8A2P25067 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.72□□□□□ -2.13
COL8A2P25067 GLYCAM1-201ENST00000546596 285 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.72□□□□□ -2.13
COL8A2P25067 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.72□□□□□ -2.13
COL8A2P25067 ROCK1P1-201ENST00000573767 549 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.72□□□□□ -2.13
COL8A2P25067 Z99497.2-201ENST00000603634 310 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 AL022161.1-201ENST00000604390 213 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC1.72□□□□□ -2.13
COL8A2P25067 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.72□□□□□ -2.13
COL8A2P25067 AL603758.1-201ENST00000618654 241 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 PISRT1-201ENST00000626175 531 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 MIR3974-201ENST00000637126 96 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 MTND4P35-201ENST00000604257 1375 ntBASIC1.72□□□□□ -2.13
COL8A2P25067 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 ANKRD20A17P-201ENST00000511745 1330 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 CR848007.1-201ENST00000442354 1699 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL8A2P25067 SDAD1P2-201ENST00000441308 2028 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.71□□□□□ -2.14
COL8A2P25067 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
COL8A2P25067 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
COL8A2P25067 AL356292.1-201ENST00000283110 373 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
COL8A2P25067 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
COL8A2P25067 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 Y_RNA.46-201ENST00000362695 102 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 SNORA23-201ENST00000365128 182 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL8A2P25067 RNU6-533P-201ENST00000384144 107 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 MIR19A-201ENST00000384878 82 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 MT-TH-201ENST00000387441 69 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AL109755.1-201ENST00000401791 649 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 MTCYBP36-201ENST00000404146 440 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 HMGB3P2-201ENST00000411913 584 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 RPL17P12-201ENST00000413391 526 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AC090960.1-201ENST00000421072 306 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.71□□□□□ -2.14
COL8A2P25067 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 AL358075.3-201ENST00000426289 226 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AC007919.1-201ENST00000429380 217 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.71□□□□□ -2.14
COL8A2P25067 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC1.71□□□□□ -2.14
COL8A2P25067 AL049734.2-201ENST00000441066 616 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AC118469.1-201ENST00000442943 488 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 RNU6-717P-201ENST00000459076 104 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 RNU7-59P-201ENST00000459101 61 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AP000797.1-201ENST00000478870 387 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AC055855.1-201ENST00000489563 579 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
COL8A2P25067 AC116337.1-201ENST00000509680 687 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.71□□□□□ -2.14
COL8A2P25067 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.71□□□□□ -2.14
COL8A2P25067 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 VBP1-203ENST00000535916 944 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC1.71□□□□□ -2.14
COL8A2P25067 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.71□□□□□ -2.14
COL8A2P25067 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC1.71□□□□□ -2.14
COL8A2P25067 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.71□□□□□ -2.14
COL8A2P25067 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 NRBF2P1-201ENST00000587407 859 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AC005498.1-201ENST00000592125 465 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AL031775.1-201ENST00000607014 887 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AC007038.2-201ENST00000608095 740 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.71□□□□□ -2.14
COL8A2P25067 AC093838.1-201ENST00000613014 469 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 TUG1_2.1-201ENST00000614234 87 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AC012150.2-201ENST00000621300 544 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 AC022079.1-201ENST00000621546 602 ntBASIC1.71□□□□□ -2.14
COL8A2P25067 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.71□□□□□ -2.14
COL8A2P25067 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.71□□□□□ -2.14
COL8A2P25067 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
COL8A2P25067 AL138713.1-201ENST00000624026 2130 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL8A2P25067 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL8A2P25067 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.7□□□□□ -2.14
COL8A2P25067 AL596028.1-201ENST00000326971 197 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 RNU5A-8P-201ENST00000364102 114 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 RNU6-461P-201ENST00000364195 107 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 RNU5E-5P-201ENST00000365379 116 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC1.7□□□□□ -2.14
COL8A2P25067 SNORA26.8-201ENST00000391306 124 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
COL8A2P25067 RPS20P2-201ENST00000402520 389 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 AL021407.1-201ENST00000404531 386 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 CCNG1P1-201ENST00000406783 885 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 AC078974.1-201ENST00000411597 223 ntBASIC1.7□□□□□ -2.14
COL8A2P25067 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.7□□□□□ -2.14
COL8A2P25067 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 143.5 ms