Protein–RNA interactions for Protein: P21709

EPHA1, Ephrin type-A receptor 1, humanhuman

Predictions only

Length 976 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA1P21709 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.34□□□□□ -1.71
EPHA1P21709 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC4.34□□□□□ -1.71
EPHA1P21709 AC011447.4-201ENST00000587562 111 ntBASIC4.34□□□□□ -1.71
EPHA1P21709 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.34□□□□□ -1.71
EPHA1P21709 AL356157.2-201ENST00000605122 111 ntBASIC4.34□□□□□ -1.71
EPHA1P21709 UBE2Q2P6-201ENST00000612666 153 ntBASIC4.34□□□□□ -1.71
EPHA1P21709 AL365265.1-201ENST00000621045 234 ntBASIC4.34□□□□□ -1.71
EPHA1P21709 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.34□□□□□ -1.71
EPHA1P21709 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHA1P21709 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
EPHA1P21709 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
EPHA1P21709 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.34□□□□□ -1.72
EPHA1P21709 AL079305.1-201ENST00000623159 3008 ntBASIC4.34□□□□□ -1.72
EPHA1P21709 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.72
EPHA1P21709 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
EPHA1P21709 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 RNU6-142P-201ENST00000384019 107 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 RNU6-20P-201ENST00000384106 107 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 SNORA29-201ENST00000384183 140 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 RNU6-1181P-201ENST00000384191 106 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 MTHFD2P2-201ENST00000407725 247 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 U3.39-201ENST00000408569 239 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 RNU6-1135P-201ENST00000411083 103 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 BMS1P22-201ENST00000414726 313 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHA1P21709 POLR2KP2-201ENST00000438155 177 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHA1P21709 AC009237.8-201ENST00000445492 379 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 snoU13.20-201ENST00000459180 104 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 RN7SL860P-201ENST00000473738 223 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHA1P21709 UBE2CP3-201ENST00000502715 450 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 SNORA40.9-201ENST00000515895 93 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 RNU6-703P-201ENST00000516946 107 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHA1P21709 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHA1P21709 MIR5695-201ENST00000579717 85 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.33□□□□□ -1.72
EPHA1P21709 FAM25E-202ENST00000608562 189 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHA1P21709 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHA1P21709 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHA1P21709 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.33□□□□□ -1.72
EPHA1P21709 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.33□□□□□ -1.72
EPHA1P21709 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
EPHA1P21709 AC008568.2-201ENST00000623862 2313 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 AC126323.6-202ENST00000568092 3511 ntBASIC4.33□□□□□ -1.72
EPHA1P21709 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
EPHA1P21709 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.33□□□□□ -1.72
EPHA1P21709 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHA1P21709 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHA1P21709 OR14L1P-202ENST00000641545 3009 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHA1P21709 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.32□□□□□ -1.72
EPHA1P21709 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHA1P21709 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.32□□□□□ -1.72
EPHA1P21709 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHA1P21709 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.32□□□□□ -1.72
EPHA1P21709 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
EPHA1P21709 RNU5B-2P-201ENST00000363036 113 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 RNU6-1175P-201ENST00000365200 107 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 RNU6-281P-201ENST00000384212 103 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
EPHA1P21709 RNU6-1001P-201ENST00000411265 100 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 AC140479.3-201ENST00000418944 1126 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 AC104333.2-201ENST00000422630 192 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 RPL23AP95-201ENST00000426806 265 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 COX6B1P7-201ENST00000430845 235 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.32□□□□□ -1.72
EPHA1P21709 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.32□□□□□ -1.72
EPHA1P21709 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.32□□□□□ -1.72
EPHA1P21709 UQCRBP2-201ENST00000447827 297 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 MRPS10P1-201ENST00000448483 130 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 snoU13.4-201ENST00000458916 104 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.32□□□□□ -1.72
EPHA1P21709 AC091874.1-201ENST00000511402 339 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 RNU6-1219P-201ENST00000516143 112 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 RNU6-1183P-201ENST00000517054 60 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 RN7SL52P-201ENST00000584271 284 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.32□□□□□ -1.72
EPHA1P21709 AL590392.1-201ENST00000604960 446 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.32□□□□□ -1.72
EPHA1P21709 AC024581.2-201ENST00000619986 252 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 AC091953.3-201ENST00000623220 236 ntBASIC4.32□□□□□ -1.72
EPHA1P21709 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.32□□□□□ -1.72
EPHA1P21709 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
EPHA1P21709 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
EPHA1P21709 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
EPHA1P21709 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.31□□□□□ -1.72
EPHA1P21709 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
EPHA1P21709 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.31□□□□□ -1.72
EPHA1P21709 RNA5SP197-201ENST00000363357 119 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms