Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.84■□□□□ 0.93
PCDHB2Q9Y5E7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 AP003041.3-201ENST00000527151 707 ntBASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 AC139887.4-201ENST00000607877 719 ntBASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.83■□□□□ 0.93
PCDHB2Q9Y5E7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB2Q9Y5E7 Z82202.1-201ENST00000623446 1880 ntBASIC20.83■□□□□ 0.92
PCDHB2Q9Y5E7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PCDHB2Q9Y5E7 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
PCDHB2Q9Y5E7 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.83■□□□□ 0.92
PCDHB2Q9Y5E7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
PCDHB2Q9Y5E7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 AC141257.4-201ENST00000634557 245 ntBASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 AC136944.6-201ENST00000634818 245 ntBASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.82■□□□□ 0.92
PCDHB2Q9Y5E7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PCDHB2Q9Y5E7 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 COX11P1-201ENST00000489116 835 ntBASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 AC063952.2-201ENST00000498792 1227 ntBASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PCDHB2Q9Y5E7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB2Q9Y5E7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB2Q9Y5E7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDHB2Q9Y5E7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PCDHB2Q9Y5E7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.79■□□□□ 0.92
PCDHB2Q9Y5E7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms