Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
PDZRN3Q9UPQ7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC24.54■■□□□ 1.52
PDZRN3Q9UPQ7 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 AL032819.2-201ENST00000624543 2162 ntBASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 KRT126P-201ENST00000549467 1181 ntBASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
PDZRN3Q9UPQ7 TNXA-203ENST00000507684 2038 ntBASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 HIST1H2APS4-201ENST00000362070 348 ntBASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 FAM207BP-201ENST00000447172 505 ntBASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 COX11P1-201ENST00000489116 835 ntBASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 AC139887.4-201ENST00000607877 719 ntBASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
PDZRN3Q9UPQ7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 AC004951.3-201ENST00000418645 1148 ntBASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 AC009947.2-201ENST00000444014 672 ntBASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 YBX1P2-201ENST00000489612 999 ntBASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 FDX2-206ENST00000492239 773 ntTSL 2 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 KRT18P56-201ENST00000507275 550 ntBASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 AL512604.3-201ENST00000569583 964 ntBASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC24.51■■□□□ 1.51
PDZRN3Q9UPQ7 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 RCC2P6-201ENST00000526625 1557 ntBASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 PTPA-216ENST00000432651 857 ntTSL 2 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 AC011298.2-201ENST00000617989 482 ntBASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 AL121956.5-201ENST00000625261 221 ntBASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC24.5■■□□□ 1.51
PDZRN3Q9UPQ7 AL031432.5-201ENST00000641059 760 ntBASIC24.5■■□□□ 1.51
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms