Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 NUDT16P1-203ENST00000513809 620 ntBASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 FSCN1P1-201ENST00000568912 1481 ntBASIC19.77■□□□□ 0.76
AP4E1Q9UPM8 AC006333.2-201ENST00000607957 2099 ntBASIC19.77■□□□□ 0.75
AP4E1Q9UPM8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.77■□□□□ 0.75
AP4E1Q9UPM8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
AP4E1Q9UPM8 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 PRSS44-201ENST00000515154 1146 ntBASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 AC130371.2-201ENST00000619443 611 ntBASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
AP4E1Q9UPM8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 FAM207BP-201ENST00000447172 505 ntBASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
AP4E1Q9UPM8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 MIR718-201ENST00000390190 70 ntBASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 AP006294.2-201ENST00000641667 209 ntBASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
AP4E1Q9UPM8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 AC116562.2-201ENST00000507042 360 ntBASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.73■□□□□ 0.75
AP4E1Q9UPM8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms