Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 AC027796.2-201ENST00000575326 344 ntBASIC17.99■□□□□ 0.47
LHX6Q9UPM6 NEK4P2-201ENST00000580004 1012 ntBASIC17.99■□□□□ 0.47
LHX6Q9UPM6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 FEM1AP4-201ENST00000443167 1987 ntBASIC17.99■□□□□ 0.47
LHX6Q9UPM6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
LHX6Q9UPM6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 AC005104.2-201ENST00000427818 678 ntBASIC17.98■□□□□ 0.47
LHX6Q9UPM6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.98■□□□□ 0.47
LHX6Q9UPM6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 PLK5-205ENST00000642079 1969 ntBASIC17.97■□□□□ 0.47
LHX6Q9UPM6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 POLD2P1-201ENST00000511220 997 ntBASIC17.97■□□□□ 0.47
LHX6Q9UPM6 AP000867.3-201ENST00000524675 377 ntBASIC17.97■□□□□ 0.47
LHX6Q9UPM6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.97■□□□□ 0.47
LHX6Q9UPM6 AC007952.6-201ENST00000573168 2673 ntBASIC17.96■□□□□ 0.47
LHX6Q9UPM6 AC003957.1-201ENST00000625108 2673 ntBASIC17.96■□□□□ 0.47
LHX6Q9UPM6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 AC005229.4-201ENST00000610085 2198 ntBASIC17.96■□□□□ 0.47
LHX6Q9UPM6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.96■□□□□ 0.47
LHX6Q9UPM6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms