Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA1Q9UND3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 AC116562.4-201ENST00000641316 2276 ntBASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 AC091390.4-202ENST00000476426 537 ntBASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 NTF6B-201ENST00000591913 560 ntBASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
NPIPA1Q9UND3 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 AC116562.4-202ENST00000641738 218 ntBASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA1Q9UND3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA1Q9UND3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms