Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 AC116562.2-201ENST00000507042 360 ntBASIC17.8■□□□□ 0.44
CNIH4Q9P003 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 HLA-A-209ENST00000638375 975 ntBASIC17.8■□□□□ 0.44
CNIH4Q9P003 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.8■□□□□ 0.44
CNIH4Q9P003 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CNIH4Q9P003 AC020763.4-201ENST00000623414 4170 ntBASIC17.8■□□□□ 0.44
CNIH4Q9P003 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH4Q9P003 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH4Q9P003 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH4Q9P003 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH4Q9P003 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 FSCN1P1-201ENST00000568912 1481 ntBASIC17.79■□□□□ 0.44
CNIH4Q9P003 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH4Q9P003 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CNIH4Q9P003 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.79■□□□□ 0.44
CNIH4Q9P003 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 AC004980.1-204ENST00000429707 299 ntBASIC17.78■□□□□ 0.44
CNIH4Q9P003 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CNIH4Q9P003 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.78■□□□□ 0.44
CNIH4Q9P003 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH4Q9P003 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH4Q9P003 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH4Q9P003 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
CNIH4Q9P003 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CNIH4Q9P003 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.77■□□□□ 0.44
CNIH4Q9P003 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.77■□□□□ 0.44
CNIH4Q9P003 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH4Q9P003 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH4Q9P003 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.77■□□□□ 0.44
CNIH4Q9P003 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH4Q9P003 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CNIH4Q9P003 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.77■□□□□ 0.44
CNIH4Q9P003 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms