Protein–RNA interactions for Protein: Q9NZC2

TREM2, Triggering receptor expressed on myeloid cells 2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2Q9NZC2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TREM2Q9NZC2 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TREM2Q9NZC2 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TREM2Q9NZC2 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TREM2Q9NZC2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TREM2Q9NZC2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TREM2Q9NZC2 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 KSR1P1-201ENST00000446298 240 ntBASIC16.43■□□□□ 0.22
TREM2Q9NZC2 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC16.43■□□□□ 0.22
TREM2Q9NZC2 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TREM2Q9NZC2 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 AC098818.2-201ENST00000564925 2320 ntBASIC16.41■□□□□ 0.22
TREM2Q9NZC2 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 KRT18P21-201ENST00000515767 1272 ntBASIC16.41■□□□□ 0.22
TREM2Q9NZC2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 AL353708.3-201ENST00000610272 989 ntBASIC16.41■□□□□ 0.22
TREM2Q9NZC2 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 HLA-A-209ENST00000638375 975 ntBASIC16.41■□□□□ 0.22
TREM2Q9NZC2 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC16.41■□□□□ 0.22
TREM2Q9NZC2 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TREM2Q9NZC2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TREM2Q9NZC2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TREM2Q9NZC2 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms