Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CDC42SE2Q9NRR3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 AL121829.2-201ENST00000620908 328 ntBASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 HLA-B-256ENST00000639848 1089 ntBASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 AR-207ENST00000612010 3896 ntTSL 5 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
CDC42SE2Q9NRR3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 AL354751.1-201ENST00000412768 1863 ntBASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 AC083906.2-201ENST00000511578 360 ntBASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 AL121832.2-201ENST00000610979 668 ntBASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 AC092437.1-201ENST00000624794 1048 ntBASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
CDC42SE2Q9NRR3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CDC42SE2Q9NRR3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CDC42SE2Q9NRR3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC42SE2Q9NRR3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.1□□□□□ -0.31
CDC42SE2Q9NRR3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CDC42SE2Q9NRR3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms