Protein–RNA interactions for Protein: Q9H4Q4

PRDM12, PR domain zinc finger protein 12, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM12Q9H4Q4 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 KRT16P6-202ENST00000425692 1426 ntBASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 AC079781.3-201ENST00000449110 356 ntBASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 AL121672.3-201ENST00000608644 468 ntBASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRDM12Q9H4Q4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRDM12Q9H4Q4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRDM12Q9H4Q4 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRDM12Q9H4Q4 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRDM12Q9H4Q4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 AP002383.4-201ENST00000442518 975 ntBASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 NUS1P1-201ENST00000446295 882 ntBASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRDM12Q9H4Q4 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 AC011498.5-201ENST00000592027 486 ntBASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 BX119927.1-201ENST00000636596 1552 ntBASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 TCF3P1-201ENST00000423021 1937 ntBASIC20.63■□□□□ 0.89
PRDM12Q9H4Q4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 AC092597.1-201ENST00000487352 616 ntBASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PRDM12Q9H4Q4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM12Q9H4Q4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.61■□□□□ 0.89
PRDM12Q9H4Q4 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PRDM12Q9H4Q4 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.61■□□□□ 0.89
PRDM12Q9H4Q4 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.61■□□□□ 0.89
PRDM12Q9H4Q4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms