Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
UBQLN3Q9H347 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 RBM17P1-201ENST00000453646 1190 ntBASIC17.63■□□□□ 0.41
UBQLN3Q9H347 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 AC131212.4-201ENST00000623606 975 ntBASIC17.63■□□□□ 0.41
UBQLN3Q9H347 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.63■□□□□ 0.41
UBQLN3Q9H347 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 FSCN1P1-201ENST00000568912 1481 ntBASIC17.62■□□□□ 0.41
UBQLN3Q9H347 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBQLN3Q9H347 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 AIRN-201ENST00000601203 4374 ntBASIC17.61■□□□□ 0.41
UBQLN3Q9H347 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 UNC93B2-201ENST00000285383 730 ntBASIC17.61■□□□□ 0.41
UBQLN3Q9H347 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 B3GAT3P1-201ENST00000471720 806 ntBASIC17.61■□□□□ 0.41
UBQLN3Q9H347 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 MIR6786-201ENST00000616843 113 ntBASIC17.61■□□□□ 0.41
UBQLN3Q9H347 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
UBQLN3Q9H347 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms