Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 WIZP1-201ENST00000531444 2299 ntBASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 AC079598.2-202ENST00000546624 1451 ntBASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 Z98044.1-201ENST00000632503 1764 ntBASIC17.61■□□□□ 0.41
POLR2J3Q9H1A7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 FEM1AP3-201ENST00000403722 1741 ntBASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 AC026471.1-201ENST00000564629 3026 ntBASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
POLR2J3Q9H1A7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 AC090164.3-201ENST00000610780 2143 ntBASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 PRKY-204ENST00000533551 1019 ntBASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 KLF2-202ENST00000592003 564 ntTSL 3 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
POLR2J3Q9H1A7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2J3Q9H1A7 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2J3Q9H1A7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2J3Q9H1A7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2J3Q9H1A7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2J3Q9H1A7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
POLR2J3Q9H1A7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 TSPY21P-201ENST00000433481 731 ntBASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 UNC93B4-201ENST00000505679 747 ntBASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.58■□□□□ 0.4
POLR2J3Q9H1A7 AC142086.2-201ENST00000569753 217 ntBASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms