Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.74■□□□□ 0.75
RNF38Q9H0F5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 AC140113.3-201ENST00000605663 199 ntBASIC19.74■□□□□ 0.75
RNF38Q9H0F5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 MYC-208ENST00000641036 567 ntBASIC19.74■□□□□ 0.75
RNF38Q9H0F5 AL031432.5-201ENST00000641059 760 ntBASIC19.74■□□□□ 0.75
RNF38Q9H0F5 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 TEX21P-204ENST00000641479 1693 ntBASIC19.74■□□□□ 0.75
RNF38Q9H0F5 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.74■□□□□ 0.75
RNF38Q9H0F5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 AC009947.2-201ENST00000444014 672 ntBASIC19.73■□□□□ 0.75
RNF38Q9H0F5 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF38Q9H0F5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 AL031133.1-201ENST00000406807 723 ntBASIC19.72■□□□□ 0.75
RNF38Q9H0F5 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.72■□□□□ 0.75
RNF38Q9H0F5 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 LINC01238-205ENST00000567549 1107 ntBASIC19.72■□□□□ 0.75
RNF38Q9H0F5 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF38Q9H0F5 GPAT2P1-201ENST00000444924 1672 ntBASIC19.71■□□□□ 0.75
RNF38Q9H0F5 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 CR769767.2-201ENST00000622735 460 ntBASIC19.71■□□□□ 0.75
RNF38Q9H0F5 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF38Q9H0F5 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF38Q9H0F5 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms