Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPBQ9H078 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.13■□□□□ 0.65
CLPBQ9H078 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPBQ9H078 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.13■□□□□ 0.65
CLPBQ9H078 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLPBQ9H078 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPBQ9H078 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.13■□□□□ 0.65
CLPBQ9H078 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPBQ9H078 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLPBQ9H078 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPBQ9H078 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLPBQ9H078 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
CLPBQ9H078 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 SDHAP1-207ENST00000440850 2000 ntBASIC19.12■□□□□ 0.65
CLPBQ9H078 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.12■□□□□ 0.65
CLPBQ9H078 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.12■□□□□ 0.65
CLPBQ9H078 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CLPBQ9H078 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 AC005521.1-201ENST00000393351 872 ntBASIC19.12■□□□□ 0.65
CLPBQ9H078 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.12■□□□□ 0.65
CLPBQ9H078 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CLPBQ9H078 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLPBQ9H078 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLPBQ9H078 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.12■□□□□ 0.65
CLPBQ9H078 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLPBQ9H078 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
CLPBQ9H078 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPBQ9H078 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
CLPBQ9H078 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.11■□□□□ 0.65
CLPBQ9H078 CRAT-202ENST00000393384 973 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPBQ9H078 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPBQ9H078 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPBQ9H078 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.11■□□□□ 0.65
CLPBQ9H078 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPBQ9H078 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.11■□□□□ 0.65
CLPBQ9H078 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLPBQ9H078 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLPBQ9H078 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.11■□□□□ 0.65
CLPBQ9H078 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLPBQ9H078 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
CLPBQ9H078 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLPBQ9H078 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.1■□□□□ 0.65
CLPBQ9H078 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPBQ9H078 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.1■□□□□ 0.65
CLPBQ9H078 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 LINC01465-201ENST00000408887 1940 ntBASIC19.1■□□□□ 0.65
CLPBQ9H078 KRT18P22-201ENST00000402024 1347 ntBASIC19.1■□□□□ 0.65
CLPBQ9H078 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPBQ9H078 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.1■□□□□ 0.65
CLPBQ9H078 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.1■□□□□ 0.65
CLPBQ9H078 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.1■□□□□ 0.65
CLPBQ9H078 AL160286.2-201ENST00000567150 934 ntBASIC19.1■□□□□ 0.65
CLPBQ9H078 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.1■□□□□ 0.65
CLPBQ9H078 DGCR10-201ENST00000609839 495 ntBASIC19.1■□□□□ 0.65
CLPBQ9H078 AC092865.7-201ENST00000641832 219 ntBASIC19.1■□□□□ 0.65
CLPBQ9H078 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLPBQ9H078 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLPBQ9H078 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms