Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCGF1Q9BSM1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC15.96■□□□□ 0.14
PCGF1Q9BSM1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC15.96■□□□□ 0.14
PCGF1Q9BSM1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.96■□□□□ 0.14
PCGF1Q9BSM1 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.96■□□□□ 0.14
PCGF1Q9BSM1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.96■□□□□ 0.14
PCGF1Q9BSM1 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC15.96■□□□□ 0.14
PCGF1Q9BSM1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC15.96■□□□□ 0.14
PCGF1Q9BSM1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCGF1Q9BSM1 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 TREX1-205ENST00000625293 1783 ntBASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 AC087499.1-201ENST00000418141 1075 ntBASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 RBM17P1-201ENST00000453646 1190 ntBASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 LINC01023-201ENST00000606054 436 ntBASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCGF1Q9BSM1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 MMP23A-201ENST00000234610 1017 ntBASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 AP000525.1-201ENST00000608286 694 ntBASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 NEFHP1-201ENST00000412845 2629 ntBASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.94■□□□□ 0.14
PCGF1Q9BSM1 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PCGF1Q9BSM1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCGF1Q9BSM1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCGF1Q9BSM1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PCGF1Q9BSM1 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC15.93■□□□□ 0.14
PCGF1Q9BSM1 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
PCGF1Q9BSM1 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms