Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 SLC29A4P1-201ENST00000398760 971 ntBASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 PNMA6B-201ENST00000538162 1200 ntBASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 HLA-B-256ENST00000639848 1089 ntBASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 MYC-209ENST00000641252 345 ntBASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.08■□□□□ 0.16
HDHD3Q9BSH5 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 TUBB8P6-201ENST00000436895 1288 ntBASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 TSPY6P-201ENST00000448518 926 ntBASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 PPP1R14BP3-201ENST00000509033 445 ntBASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 AC120498.8-201ENST00000614275 531 ntBASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HDHD3Q9BSH5 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 AC097658.1-201ENST00000475555 843 ntBASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 SOX15-203ENST00000570788 1093 ntBASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.06■□□□□ 0.16
HDHD3Q9BSH5 ANO7L1-203ENST00000602586 1720 ntBASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
HDHD3Q9BSH5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms