Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NPAS1Q99742 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS1Q99742 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.35■□□□□ 0.37
NPAS1Q99742 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS1Q99742 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
NPAS1Q99742 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.35■□□□□ 0.37
NPAS1Q99742 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS1Q99742 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.35■□□□□ 0.37
NPAS1Q99742 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 FSCN1P1-201ENST00000568912 1481 ntBASIC17.35■□□□□ 0.37
NPAS1Q99742 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.35■□□□□ 0.37
NPAS1Q99742 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NPAS1Q99742 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS1Q99742 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS1Q99742 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS1Q99742 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS1Q99742 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS1Q99742 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS1Q99742 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS1Q99742 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NPAS1Q99742 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS1Q99742 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.34■□□□□ 0.37
NPAS1Q99742 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS1Q99742 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS1Q99742 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NPAS1Q99742 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS1Q99742 AL390955.1-201ENST00000428694 934 ntBASIC17.34■□□□□ 0.37
NPAS1Q99742 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.34■□□□□ 0.37
NPAS1Q99742 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NPAS1Q99742 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.34■□□□□ 0.37
NPAS1Q99742 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.34■□□□□ 0.37
NPAS1Q99742 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.34■□□□□ 0.37
NPAS1Q99742 AP000525.1-201ENST00000608286 694 ntBASIC17.34■□□□□ 0.37
NPAS1Q99742 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NPAS1Q99742 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS1Q99742 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS1Q99742 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS1Q99742 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
NPAS1Q99742 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS1Q99742 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS1Q99742 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS1Q99742 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NPAS1Q99742 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS1Q99742 AC018445.3-201ENST00000624177 1945 ntBASIC17.33■□□□□ 0.37
NPAS1Q99742 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS1Q99742 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NPAS1Q99742 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.33■□□□□ 0.37
NPAS1Q99742 KRT8P9-201ENST00000558927 1449 ntBASIC17.33■□□□□ 0.36
NPAS1Q99742 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.33■□□□□ 0.36
NPAS1Q99742 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.33■□□□□ 0.36
NPAS1Q99742 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NPAS1Q99742 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS1Q99742 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS1Q99742 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.33■□□□□ 0.36
NPAS1Q99742 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
NPAS1Q99742 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.33■□□□□ 0.36
NPAS1Q99742 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS1Q99742 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS1Q99742 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS1Q99742 AL161938.1-201ENST00000569833 2180 ntBASIC17.33■□□□□ 0.36
NPAS1Q99742 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NPAS1Q99742 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NPAS1Q99742 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
NPAS1Q99742 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS1Q99742 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS1Q99742 KRT17P2-201ENST00000300992 1314 ntBASIC17.32■□□□□ 0.36
NPAS1Q99742 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.32■□□□□ 0.36
NPAS1Q99742 FAM207BP-201ENST00000447172 505 ntBASIC17.32■□□□□ 0.36
NPAS1Q99742 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NPAS1Q99742 AP000692.2-201ENST00000608391 879 ntBASIC17.32■□□□□ 0.36
NPAS1Q99742 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.32■□□□□ 0.36
NPAS1Q99742 IRX1P1-201ENST00000438849 1838 ntBASIC17.32■□□□□ 0.36
NPAS1Q99742 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS1Q99742 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NPAS1Q99742 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NPAS1Q99742 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.32■□□□□ 0.36
NPAS1Q99742 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NPAS1Q99742 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
NPAS1Q99742 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NPAS1Q99742 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NPAS1Q99742 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms