Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.37■□□□□ 0.53
CDC6Q99741 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC6Q99741 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.37■□□□□ 0.53
CDC6Q99741 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC6Q99741 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC6Q99741 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.37■□□□□ 0.53
CDC6Q99741 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC6Q99741 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.37■□□□□ 0.53
CDC6Q99741 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC6Q99741 AC093525.10-201ENST00000625130 1569 ntBASIC18.37■□□□□ 0.53
CDC6Q99741 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDC6Q99741 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CDC6Q99741 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.37■□□□□ 0.53
CDC6Q99741 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC6Q99741 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
CDC6Q99741 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDC6Q99741 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CDC6Q99741 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CDC6Q99741 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CDC6Q99741 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDC6Q99741 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CDC6Q99741 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC6Q99741 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC6Q99741 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC6Q99741 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.36■□□□□ 0.53
CDC6Q99741 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC6Q99741 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.36■□□□□ 0.53
CDC6Q99741 IFNL4P1-201ENST00000607083 540 ntBASIC18.36■□□□□ 0.53
CDC6Q99741 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC6Q99741 AL121772.3-201ENST00000610840 674 ntBASIC18.36■□□□□ 0.53
CDC6Q99741 GPALPP1-207ENST00000611650 899 ntBASIC18.36■□□□□ 0.53
CDC6Q99741 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC6Q99741 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.36■□□□□ 0.53
CDC6Q99741 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.36■□□□□ 0.53
CDC6Q99741 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.36■□□□□ 0.53
CDC6Q99741 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CDC6Q99741 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
CDC6Q99741 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 AL162741.1-201ENST00000565563 1558 ntBASIC18.35■□□□□ 0.53
CDC6Q99741 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDC6Q99741 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CDC6Q99741 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.35■□□□□ 0.53
CDC6Q99741 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CDC6Q99741 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.35■□□□□ 0.53
CDC6Q99741 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CDC6Q99741 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.35■□□□□ 0.53
CDC6Q99741 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
CDC6Q99741 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CDC6Q99741 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC6Q99741 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDC6Q99741 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CDC6Q99741 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 KRT18P1-202ENST00000452408 1331 ntBASIC18.34■□□□□ 0.53
CDC6Q99741 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.34■□□□□ 0.53
CDC6Q99741 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CDC6Q99741 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.34■□□□□ 0.53
CDC6Q99741 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC6Q99741 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC6Q99741 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDC6Q99741 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC6Q99741 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.34■□□□□ 0.53
CDC6Q99741 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms