Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CDCA3Q99618 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
CDCA3Q99618 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.83■□□□□ 0.77
CDCA3Q99618 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.83■□□□□ 0.77
CDCA3Q99618 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA3Q99618 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA3Q99618 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
CDCA3Q99618 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.83■□□□□ 0.76
CDCA3Q99618 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.83■□□□□ 0.76
CDCA3Q99618 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
CDCA3Q99618 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.83■□□□□ 0.76
CDCA3Q99618 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.82■□□□□ 0.76
CDCA3Q99618 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
CDCA3Q99618 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CDCA3Q99618 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.82■□□□□ 0.76
CDCA3Q99618 AC079781.3-201ENST00000449110 356 ntBASIC19.82■□□□□ 0.76
CDCA3Q99618 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.82■□□□□ 0.76
CDCA3Q99618 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.82■□□□□ 0.76
CDCA3Q99618 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.82■□□□□ 0.76
CDCA3Q99618 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.82■□□□□ 0.76
CDCA3Q99618 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.82■□□□□ 0.76
CDCA3Q99618 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC19.82■□□□□ 0.76
CDCA3Q99618 RNF126P1-202ENST00000569893 925 ntBASIC19.82■□□□□ 0.76
CDCA3Q99618 AC004263.2-201ENST00000617183 678 ntBASIC19.82■□□□□ 0.76
CDCA3Q99618 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.82■□□□□ 0.76
CDCA3Q99618 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CDCA3Q99618 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDCA3Q99618 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.81■□□□□ 0.76
CDCA3Q99618 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.81■□□□□ 0.76
CDCA3Q99618 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDCA3Q99618 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CDCA3Q99618 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.81■□□□□ 0.76
CDCA3Q99618 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.81■□□□□ 0.76
CDCA3Q99618 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.81■□□□□ 0.76
CDCA3Q99618 AP002469.2-201ENST00000531724 424 ntBASIC19.81■□□□□ 0.76
CDCA3Q99618 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.81■□□□□ 0.76
CDCA3Q99618 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CDCA3Q99618 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.81■□□□□ 0.76
CDCA3Q99618 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDCA3Q99618 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.81■□□□□ 0.76
CDCA3Q99618 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CDCA3Q99618 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CDCA3Q99618 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.81■□□□□ 0.76
CDCA3Q99618 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA3Q99618 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA3Q99618 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA3Q99618 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA3Q99618 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.8■□□□□ 0.76
CDCA3Q99618 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA3Q99618 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.8■□□□□ 0.76
CDCA3Q99618 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CDCA3Q99618 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.8■□□□□ 0.76
CDCA3Q99618 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA3Q99618 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CDCA3Q99618 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA3Q99618 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA3Q99618 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.8■□□□□ 0.76
CDCA3Q99618 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CDCA3Q99618 AL162377.1-201ENST00000618844 1793 ntBASIC19.8■□□□□ 0.76
CDCA3Q99618 AL512408.1-201ENST00000569378 2000 ntBASIC19.8■□□□□ 0.76
CDCA3Q99618 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CDCA3Q99618 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDCA3Q99618 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA3Q99618 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDCA3Q99618 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CDCA3Q99618 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA3Q99618 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA3Q99618 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA3Q99618 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA3Q99618 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA3Q99618 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.79■□□□□ 0.76
CDCA3Q99618 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
CDCA3Q99618 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA3Q99618 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.79■□□□□ 0.76
CDCA3Q99618 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.79■□□□□ 0.76
CDCA3Q99618 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.79■□□□□ 0.76
CDCA3Q99618 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.79■□□□□ 0.76
CDCA3Q99618 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.79■□□□□ 0.76
CDCA3Q99618 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.79■□□□□ 0.76
CDCA3Q99618 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.79■□□□□ 0.76
CDCA3Q99618 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CDCA3Q99618 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CDCA3Q99618 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CDCA3Q99618 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms