Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 AL023284.2-201ENST00000405850 579 ntBASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 MCCD1P1-208ENST00000445732 328 ntBASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 SEC1P-202ENST00000473944 940 ntBASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 AP000867.3-201ENST00000524675 377 ntBASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 TPSP2-201ENST00000561760 610 ntBASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 AC012615.1-201ENST00000565797 1299 ntBASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 AL732292.2-201ENST00000609649 430 ntBASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 AC004263.2-201ENST00000617183 678 ntBASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.71■□□□□ 0.75
NECTIN4Q96NY8 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 LINC00265-3P-201ENST00000447588 903 ntBASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 AL662844.1-201ENST00000546340 181 ntBASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 AC079602.3-201ENST00000623931 403 ntBASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
NECTIN4Q96NY8 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 MIR3917-201ENST00000580971 93 ntBASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 AC112497.1-201ENST00000624824 639 ntBASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 AC104417.2-201ENST00000562989 1793 ntBASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
NECTIN4Q96NY8 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 AL391807.1-203ENST00000604392 2365 ntBASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 AC106795.1-205ENST00000512851 1056 ntBASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.68■□□□□ 0.74
NECTIN4Q96NY8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.67■□□□□ 0.74
NECTIN4Q96NY8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms