Protein–RNA interactions for Protein: Q96IW2

SHD, SH2 domain-containing adapter protein D, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHDQ96IW2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SHDQ96IW2 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SHDQ96IW2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
SHDQ96IW2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHDQ96IW2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHDQ96IW2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.22■□□□□ 0.67
SHDQ96IW2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHDQ96IW2 AC104417.2-201ENST00000562989 1793 ntBASIC19.22■□□□□ 0.67
SHDQ96IW2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHDQ96IW2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
SHDQ96IW2 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.22■□□□□ 0.67
SHDQ96IW2 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.22■□□□□ 0.67
SHDQ96IW2 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.22■□□□□ 0.67
SHDQ96IW2 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHDQ96IW2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC19.22■□□□□ 0.67
SHDQ96IW2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.22■□□□□ 0.67
SHDQ96IW2 AP002469.2-201ENST00000531724 424 ntBASIC19.22■□□□□ 0.67
SHDQ96IW2 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.22■□□□□ 0.67
SHDQ96IW2 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SHDQ96IW2 CLDN5-201ENST00000403084 2357 ntBASIC19.22■□□□□ 0.67
SHDQ96IW2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHDQ96IW2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SHDQ96IW2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.22■□□□□ 0.67
SHDQ96IW2 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.21■□□□□ 0.67
SHDQ96IW2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SHDQ96IW2 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
SHDQ96IW2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SHDQ96IW2 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
SHDQ96IW2 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
SHDQ96IW2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.21■□□□□ 0.67
SHDQ96IW2 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.21■□□□□ 0.67
SHDQ96IW2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SHDQ96IW2 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.21■□□□□ 0.67
SHDQ96IW2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SHDQ96IW2 CALM3-211ENST00000598871 561 ntTSL 4 BASIC19.21■□□□□ 0.67
SHDQ96IW2 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SHDQ96IW2 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.21■□□□□ 0.67
SHDQ96IW2 AC117500.6-201ENST00000624871 588 ntBASIC19.21■□□□□ 0.67
SHDQ96IW2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHDQ96IW2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SHDQ96IW2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.21■□□□□ 0.67
SHDQ96IW2 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SHDQ96IW2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.66
SHDQ96IW2 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.2■□□□□ 0.66
SHDQ96IW2 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.2■□□□□ 0.66
SHDQ96IW2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
SHDQ96IW2 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SHDQ96IW2 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.2■□□□□ 0.66
SHDQ96IW2 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
SHDQ96IW2 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SHDQ96IW2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SHDQ96IW2 AL121912.1-201ENST00000603683 238 ntBASIC19.2■□□□□ 0.66
SHDQ96IW2 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
SHDQ96IW2 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.2■□□□□ 0.66
SHDQ96IW2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SHDQ96IW2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHDQ96IW2 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SHDQ96IW2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.19■□□□□ 0.66
SHDQ96IW2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SHDQ96IW2 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.19■□□□□ 0.66
SHDQ96IW2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.19■□□□□ 0.66
SHDQ96IW2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 SLC25A6P4-201ENST00000586535 553 ntBASIC19.19■□□□□ 0.66
SHDQ96IW2 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.19■□□□□ 0.66
SHDQ96IW2 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.19■□□□□ 0.66
SHDQ96IW2 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 AC020907.5-201ENST00000624372 1936 ntBASIC19.19■□□□□ 0.66
SHDQ96IW2 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHDQ96IW2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHDQ96IW2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.18■□□□□ 0.66
SHDQ96IW2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHDQ96IW2 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHDQ96IW2 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms