Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 CYP2T3P-201ENST00000601990 817 ntBASIC18.74■□□□□ 0.59
SPDL1Q96EA4 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.74■□□□□ 0.59
SPDL1Q96EA4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 AC046158.3-201ENST00000624947 2558 ntBASIC18.74■□□□□ 0.59
SPDL1Q96EA4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 AC068338.2-201ENST00000563278 1430 ntBASIC18.74■□□□□ 0.59
SPDL1Q96EA4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SPDL1Q96EA4 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 AC023632.3-201ENST00000521633 145 ntBASIC18.73■□□□□ 0.59
SPDL1Q96EA4 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.73■□□□□ 0.59
SPDL1Q96EA4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 AC084018.2-201ENST00000613093 2607 ntBASIC18.72■□□□□ 0.59
SPDL1Q96EA4 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 CNN2P6-201ENST00000439038 900 ntBASIC18.72■□□□□ 0.59
SPDL1Q96EA4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SPDL1Q96EA4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 AL354751.1-201ENST00000412768 1863 ntBASIC18.71■□□□□ 0.59
SPDL1Q96EA4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SPDL1Q96EA4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
SPDL1Q96EA4 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms