Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 AC008622.2-201ENST00000617006 1229 ntBASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 AC073508.3-201ENST00000619697 1419 ntBASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
ECHDC3Q96DC8 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.04■□□□□ 0.64
ECHDC3Q96DC8 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 TERF1P1-201ENST00000311003 1181 ntBASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 RCN1P1-201ENST00000400413 996 ntBASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 MIR4674-201ENST00000582457 87 ntBASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC3Q96DC8 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 AC010203.1-204ENST00000548782 407 ntBASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC3Q96DC8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ECHDC3Q96DC8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 AL161938.1-201ENST00000569833 2180 ntBASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 AC005521.1-201ENST00000393351 872 ntBASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC3Q96DC8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms