Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDF1Q96CC6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDF1Q96CC6 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.55■□□□□ 0.56
RHBDF1Q96CC6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDF1Q96CC6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDF1Q96CC6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDF1Q96CC6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDF1Q96CC6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
RHBDF1Q96CC6 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 AL138781.2-201ENST00000617896 1843 ntBASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 KRT16P1-201ENST00000399124 1418 ntBASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
RHBDF1Q96CC6 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
RHBDF1Q96CC6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 AC093525.10-201ENST00000625130 1569 ntBASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 KRT8P11-201ENST00000409686 1436 ntBASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 AC098590.1-201ENST00000468126 897 ntBASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 AC073195.1-201ENST00000607241 877 ntBASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 CR392000.1-201ENST00000624770 1228 ntBASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
RHBDF1Q96CC6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.52■□□□□ 0.55
RHBDF1Q96CC6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
RHBDF1Q96CC6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.52■□□□□ 0.55
RHBDF1Q96CC6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RHBDF1Q96CC6 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.52■□□□□ 0.55
RHBDF1Q96CC6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 RCC2P6-201ENST00000526625 1557 ntBASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
RHBDF1Q96CC6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms