Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 AL512353.2-201ENST00000448759 1962 ntBASIC20.32■□□□□ 0.84
SHC3Q92529 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.32■□□□□ 0.84
SHC3Q92529 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.32■□□□□ 0.84
SHC3Q92529 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.32■□□□□ 0.84
SHC3Q92529 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
SHC3Q92529 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
SHC3Q92529 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.32■□□□□ 0.84
SHC3Q92529 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.32■□□□□ 0.84
SHC3Q92529 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHC3Q92529 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHC3Q92529 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
SHC3Q92529 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
SHC3Q92529 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHC3Q92529 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.31■□□□□ 0.84
SHC3Q92529 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.31■□□□□ 0.84
SHC3Q92529 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.31■□□□□ 0.84
SHC3Q92529 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC3Q92529 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHC3Q92529 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.31■□□□□ 0.84
SHC3Q92529 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.31■□□□□ 0.84
SHC3Q92529 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.31■□□□□ 0.84
SHC3Q92529 AC113410.3-201ENST00000623366 203 ntBASIC20.31■□□□□ 0.84
SHC3Q92529 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC3Q92529 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC3Q92529 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
SHC3Q92529 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC3Q92529 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHC3Q92529 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHC3Q92529 Z98044.1-201ENST00000632503 1764 ntBASIC20.31■□□□□ 0.84
SHC3Q92529 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
SHC3Q92529 FSCN1P1-201ENST00000568912 1481 ntBASIC20.3■□□□□ 0.84
SHC3Q92529 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC3Q92529 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHC3Q92529 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SHC3Q92529 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC3Q92529 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHC3Q92529 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
SHC3Q92529 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC3Q92529 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.3■□□□□ 0.84
SHC3Q92529 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SHC3Q92529 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.3■□□□□ 0.84
SHC3Q92529 CKBP1-201ENST00000565489 1086 ntBASIC20.3■□□□□ 0.84
SHC3Q92529 AL049637.2-201ENST00000641778 930 ntBASIC20.3■□□□□ 0.84
SHC3Q92529 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC3Q92529 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHC3Q92529 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SHC3Q92529 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.3■□□□□ 0.84
SHC3Q92529 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.3■□□□□ 0.84
SHC3Q92529 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SHC3Q92529 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHC3Q92529 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.29■□□□□ 0.84
SHC3Q92529 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.29■□□□□ 0.84
SHC3Q92529 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.29■□□□□ 0.84
SHC3Q92529 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.29■□□□□ 0.84
SHC3Q92529 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.29■□□□□ 0.84
SHC3Q92529 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SHC3Q92529 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
SHC3Q92529 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.29■□□□□ 0.84
SHC3Q92529 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.29■□□□□ 0.84
SHC3Q92529 FAM207BP-201ENST00000447172 505 ntBASIC20.29■□□□□ 0.84
SHC3Q92529 AC116562.2-201ENST00000507042 360 ntBASIC20.29■□□□□ 0.84
SHC3Q92529 AP000692.2-201ENST00000608391 879 ntBASIC20.29■□□□□ 0.84
SHC3Q92529 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.29■□□□□ 0.84
SHC3Q92529 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC20.29■□□□□ 0.84
SHC3Q92529 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
SHC3Q92529 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHC3Q92529 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.29■□□□□ 0.84
SHC3Q92529 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
SHC3Q92529 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 KRT8P3-201ENST00000519669 1449 ntBASIC20.28■□□□□ 0.84
SHC3Q92529 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SHC3Q92529 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
SHC3Q92529 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHC3Q92529 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
SHC3Q92529 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SHC3Q92529 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms