Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 AL158047.1-201ENST00000445918 881 ntBASIC18.59■□□□□ 0.57
ATL1Q8WXF7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 AC098590.1-201ENST00000468126 897 ntBASIC18.59■□□□□ 0.57
ATL1Q8WXF7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 AP001412.1-201ENST00000608405 714 ntBASIC18.59■□□□□ 0.57
ATL1Q8WXF7 CR392000.1-201ENST00000624770 1228 ntBASIC18.59■□□□□ 0.57
ATL1Q8WXF7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
ATL1Q8WXF7 AP000974.1-201ENST00000623909 2387 ntBASIC18.59■□□□□ 0.57
ATL1Q8WXF7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.58■□□□□ 0.57
ATL1Q8WXF7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
ATL1Q8WXF7 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 TSPY23P-201ENST00000440136 739 ntBASIC18.57■□□□□ 0.56
ATL1Q8WXF7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.57■□□□□ 0.56
ATL1Q8WXF7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
ATL1Q8WXF7 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
ATL1Q8WXF7 AC004951.3-201ENST00000418645 1148 ntBASIC18.56■□□□□ 0.56
ATL1Q8WXF7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms