Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
U2AF1L4Q8WU68 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
U2AF1L4Q8WU68 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
U2AF1L4Q8WU68 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 SPDYE15P-201ENST00000424157 909 ntBASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 NEK4P2-201ENST00000580004 1012 ntBASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.77■■□□□ 1.08
U2AF1L4Q8WU68 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
U2AF1L4Q8WU68 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
U2AF1L4Q8WU68 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.76■■□□□ 1.07
U2AF1L4Q8WU68 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 AL022342.1-201ENST00000400363 863 ntBASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
U2AF1L4Q8WU68 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 AC009078.2-202ENST00000463353 338 ntBASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 SMG8-203ENST00000578922 2178 ntBASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
U2AF1L4Q8WU68 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 AL645929.1-201ENST00000420084 975 ntBASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.73■■□□□ 1.07
U2AF1L4Q8WU68 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
U2AF1L4Q8WU68 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2AF1L4Q8WU68 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21.72■■□□□ 1.07
U2AF1L4Q8WU68 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
U2AF1L4Q8WU68 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2AF1L4Q8WU68 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
U2AF1L4Q8WU68 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms