Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.17■■□□□ 1.3
SNED1Q8TER0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
SNED1Q8TER0 TSPY12P-201ENST00000421279 868 ntBASIC23.17■■□□□ 1.3
SNED1Q8TER0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 AP002469.2-201ENST00000531724 424 ntBASIC23.17■■□□□ 1.3
SNED1Q8TER0 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.17■■□□□ 1.3
SNED1Q8TER0 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 AC012615.1-201ENST00000565797 1299 ntBASIC23.17■■□□□ 1.3
SNED1Q8TER0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.17■■□□□ 1.3
SNED1Q8TER0 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.17■■□□□ 1.3
SNED1Q8TER0 AL391422.3-201ENST00000603791 2761 ntBASIC23.17■■□□□ 1.3
SNED1Q8TER0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC23.17■■□□□ 1.3
SNED1Q8TER0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
SNED1Q8TER0 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.17■■□□□ 1.3
SNED1Q8TER0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.17■■□□□ 1.3
SNED1Q8TER0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SNED1Q8TER0 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 TSPY22P-201ENST00000427496 604 ntBASIC23.16■■□□□ 1.3
SNED1Q8TER0 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
SNED1Q8TER0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.16■■□□□ 1.3
SNED1Q8TER0 AC099778.1-201ENST00000568593 1911 ntBASIC23.15■■□□□ 1.3
SNED1Q8TER0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.15■■□□□ 1.3
SNED1Q8TER0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC23.15■■□□□ 1.3
SNED1Q8TER0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.15■■□□□ 1.3
SNED1Q8TER0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SNED1Q8TER0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
SNED1Q8TER0 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.15■■□□□ 1.3
SNED1Q8TER0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC23.15■■□□□ 1.3
SNED1Q8TER0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC23.15■■□□□ 1.3
SNED1Q8TER0 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.15■■□□□ 1.3
SNED1Q8TER0 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
SNED1Q8TER0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SNED1Q8TER0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SNED1Q8TER0 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
SNED1Q8TER0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
SNED1Q8TER0 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNED1Q8TER0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNED1Q8TER0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
SNED1Q8TER0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNED1Q8TER0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
SNED1Q8TER0 TOB2P1-201ENST00000469761 992 ntBASIC23.14■■□□□ 1.29
SNED1Q8TER0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC23.14■■□□□ 1.29
SNED1Q8TER0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC23.14■■□□□ 1.29
SNED1Q8TER0 GXYLT1P4-201ENST00000613576 1192 ntBASIC23.14■■□□□ 1.29
SNED1Q8TER0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC23.14■■□□□ 1.29
SNED1Q8TER0 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
SNED1Q8TER0 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
SNED1Q8TER0 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.13■■□□□ 1.29
SNED1Q8TER0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNED1Q8TER0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNED1Q8TER0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
SNED1Q8TER0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms