Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 TERC-201ENST00000602385 541 ntBASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 AC010240.3-201ENST00000607688 395 ntBASIC12.84□□□□□ -0.35
ALMS1Q8TCU4 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
ALMS1Q8TCU4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC12.83□□□□□ -0.35
ALMS1Q8TCU4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 RPSAP43-201ENST00000402237 625 ntBASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 AC096582.2-201ENST00000510860 516 ntBASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 AL049840.3-201ENST00000602669 611 ntBASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 AC018712.1-201ENST00000455767 687 ntBASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 AC112497.1-201ENST00000624824 639 ntBASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.36
ALMS1Q8TCU4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 AC092720.2-201ENST00000602388 1665 ntBASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
ALMS1Q8TCU4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 GRAMD4P1-201ENST00000435181 1110 ntBASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 FAM215A-202ENST00000632077 792 ntBASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 AL035633.1-201ENST00000406139 838 ntBASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 GPX1P2-201ENST00000429271 606 ntBASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 AC233702.3-201ENST00000578656 1387 ntBASIC12.81□□□□□ -0.36
ALMS1Q8TCU4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms