Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SHKBP1Q8TBC3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 AC140113.3-201ENST00000605663 199 ntBASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 AC098818.2-201ENST00000564925 2320 ntBASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
SHKBP1Q8TBC3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 AL359075.1-203ENST00000462729 1002 ntBASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 AC104417.2-201ENST00000562989 1793 ntBASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SHKBP1Q8TBC3 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 TCF3P1-201ENST00000423021 1937 ntBASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 HOMER2P1-201ENST00000455653 964 ntBASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SHKBP1Q8TBC3 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.95■□□□□ 0.78
SHKBP1Q8TBC3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms